当前解析结果
SmilChr07G000383| 统一新 Gene ID | SmilChr07G000383 |
|---|---|
| 名称 | SmilChr07G000383 |
| 描述 | F-box/LRR-repeat protein At3g59190-like |
| 染色体 / SeqID | Chr07 / NC_080393.1 |
| 坐标与链方向 | 2578809 - 2580075 / + |
| NCBI Gene ID | LOC130991584 |
|---|---|
| GeneID | 130991584 |
| locus_tag | - |
| NCBI Name | LOC130991584 |
| 原始查询 | LOC130991584 |
| 来源 | GFF basic annotation; NCBI GO GAF; Arabidopsis/Rice homolog |
|---|---|
| 描述 | F-box/LRR-repeat protein At3g59190-like |
| 产物 | F-box/LRR-repeat protein At3g59190-like |
| Arabidopsis | AT3G59190 (AT3G59190)F-box/RNI-like superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:825088] identity=28.9; qcov=0.791; evalue=2.98e-13; confidence=low |
| Rice | -- |
| GO | GO:0005515 (protein binding) |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130991584 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus | 细胞核 | 1.00000 | XP_057771857.1 |
| 2 | Chromosome | 染色体 | 0.00000 | XP_057771857.1 |
| 3 | Centromere | 着丝粒 | 0.00000 | XP_057771857.1 |
| 4 | Chromatin | 染色质 | 0.00000 | XP_057771857.1 |
| 5 | Telomere | 端粒 | 0.00000 | XP_057771857.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr7:2578820 |
TC |
T |
1bp_deletion | frameshift_variant | 1 | A25 |
Chr7:2578820 |
TC |
T |
1bp_deletion | CDS_variant | 1 | A25 |
Chr7:2578821 |
C |
T |
EMS_canonical_SNV | stop_gained | 2 | A25,B70 |
Chr7:2578821 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | A25,B70 |
Chr7:2578919 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B73 |
Chr7:2578949 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B75,B9 |
Chr7:2578970 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | A18 |
Chr7:2579026 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B94 |
Chr7:2579051 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B1,D11 |
Chr7:2579071 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | C16,C61 |
Chr7:2579073 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B44,C58 |
Chr7:2579081 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B75 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。