Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr07G000602`

染色体: Chr07 坐标: 4115537-4121484 链方向: - 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr07G000602`
名称	SmilChr07G000602
描述	uncharacterized SmilChr07G000602
染色体 / SeqID	Chr07 / NC_080393.1
坐标与链方向	4115537 - 4121484 / `-`

ID 对照

NCBI Gene ID	`LOC130991770`
GeneID	`130991770`
locus_tag	`-`
NCBI Name	`LOC130991770`
原始查询	`LOC130991770`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	BTB/POZ domain-containing protein [Source:NCBI gene (formerly Entrezgene);Acc:827265]; symbol=AT4G15840; hit=AT4G15840; species=arabidopsis; confidence=high
产物	BTB/POZ domain-containing protein [Source:NCBI gene (formerly Entrezgene);Acc:827265]; symbol=AT4G15840; hit=AT4G15840; species=arabidopsis; confidence=high
Arabidopsis	`AT4G15840` (AT4G15840) BTB/POZ domain-containing protein [Source:NCBI gene (formerly Entrezgene);Acc:827265] identity=57.4; qcov=0.958; evalue=0; confidence=high
Rice	`Os01g0932600` - identity=57.7; qcov=0.931; evalue=0; confidence=high
GO	GO:0005515 (protein binding)
KEGG	-
Pfam	PF00651 (BTB)
InterPro	-
eggNOG	-
NR	GeneID:130991770

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Cytoplasm	细胞质	1.00000	`XP_057772144.1`
2	Cytosol	细胞质基质	1.00000	`XP_057772144.1`
3	Nucleus	细胞核	0.80000	`XP_057772144.1`
4	Chromosome	染色体	0.00000	`XP_057772144.1`
5	Centromere	着丝粒	0.00000	`XP_057772144.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr7:4115896`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	A7,D3
`Chr7:4115962`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	A15,B4
`Chr7:4116023`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	B57,B91
`Chr7:4117009`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B66
`Chr7:4117707`	`G`	`A`	EMS_canonical_SNV	CDS_variant	5	A11,B21,B30,C51,C71
`Chr7:4117718`	`TC`	`T`	1bp_deletion	frameshift_variant	1	D10
`Chr7:4117718`	`TC`	`T`	1bp_deletion	CDS_variant	1	D10
`Chr7:4117728`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B14
`Chr7:4117743`	`G`	`A`	EMS_canonical_SNV	CDS_variant	2	B127,C20
`Chr7:4117858`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B101
`Chr7:4117862`	`G`	`A`	EMS_canonical_SNV	CDS_variant	5	A23,B65,B67,B72,C83
`Chr7:4118048`	`G`	`A`	EMS_canonical_SNV	CDS_variant	5	B117,B127,B19,C9,D7

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057772144.1

890 aa

445

890

BTB

PF00651 BTB 81-185 aa

XP_057772145.1

890 aa

445

890

BTB

PF00651 BTB 81-185 aa

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057772144.1`	Pfam	`PF00651`	BTB	Domain	81	185	2.4e-14	54.1	BTB/POZ domain
`XP_057772145.1`	Pfam	`PF00651`	BTB	Domain	81	185	2.4e-14	54.1	BTB/POZ domain

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

3 records

下载 cDNA FASTA

XR_009091185.1
TGCCCCACTGCATAAAATCTGCAAACCAATTCTGCATCGCATGCATCCTCACTGTCCAAATTTCTCCACCGAAATTGCATCTGTACATACAAATCATCGTATGCATATGTTATGGAGCCTCCGCCACCTCAATTGTTGGCATCGCAACCGCAGCATTTCTCCGTCAGGCGATACAACCACCGCAGCCACCGCGGCGAGGGCGGCGGGCCGGTGGAGATGACGAAGGAGCACTCCCACTCGGAGATTAGCGAGAGCAGCAG...

XM_057916161.1
CTCAATTGCTTTCGTCTACACTATCAAATGCCCCACTGCATAAAATCTGCAAACCAATTCTGCATCGCATGCATCCTCACTGTCCAAATTTCTCCACCGAAATTGCATCTGTACATACAAATCATCGTATGCATATGTTATGGAGCCTCCGCCACCTCAATTGTTGGCATCGCAACCGCAGCATTTCTCCGTCAGGCGATACAACCACCGCAGCCACCGCGGCGAGGGCGGCGGGCCGGTGGAGATGACGAAGGAGCACT...

CDS

2 records

下载 CDS FASTA

LOC130991770
ATGGAGCCTCCGCCACCTCAATTGTTGGCATCGCAACCGCAGCATTTCTCCGTCAGGCGATACAACCACCGCAGCCACCGCGGCGAGGGCGGCGGGCCGGTGGAGATGACGAAGGAGCACTCCCACTCGGAGATTAGCGAGAGCAGCAGCGCCGGGGAGAGGCGCGGCGGAGGCGAGATGCGCCGCGCCGCGCTGGATTGTAACCTGGCGTCGCTCTGCGATCACATCCAATTGGAAGGGTTTAATAACGGCGTGTTCTC...

Protein

2 records

下载 Protein FASTA

XP_057772144.1
MEPPPPQLLASQPQHFSVRRYNHRSHRGEGGGPVEMTKEHSHSEISESSSAGERRGGGEMRRAALDCNLASLCDHIQLEGFNNGVFSDVVLNAMGSTYHLHRLILSRSSYFRNMLQGPWKEANAPVLTLNVDDSNVNGEAMEIALAYLYGHYPKLNDNNAFRVLAAASFLDLQDLCAICTDFIIAELWSTNFLTYQVFAESQDYGSHGERVRNACWGYLCQSGAQELKEVLPKLSSQTLLALLTSDELWVPNEEKRFELA...

XP_057772145.1
MEPPPPQLLASQPQHFSVRRYNHRSHRGEGGGPVEMTKEHSHSEISESSSAGERRGGGEMRRAALDCNLASLCDHIQLEGFNNGVFSDVVLNAMGSTYHLHRLILSRSSYFRNMLQGPWKEANAPVLTLNVDDSNVNGEAMEIALAYLYGHYPKLNDNNAFRVLAAASFLDLQDLCAICTDFIIAELWSTNFLTYQVFAESQDYGSHGERVRNACWGYLCQSGAQELKEVLPKLSSQTLLALLTSDELWVPNEEKRFELA...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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