当前解析结果
SmilChr07G000810| 统一新 Gene ID | SmilChr07G000810 |
|---|---|
| 名称 | SmilChr07G000810 |
| 描述 | uncharacterized SmilChr07G000810 |
| 染色体 / SeqID | Chr07 / NC_080393.1 |
| 坐标与链方向 | 5710930 - 5714965 / - |
| NCBI Gene ID | LOC130991978 |
|---|---|
| GeneID | 130991978 |
| locus_tag | - |
| NCBI Name | LOC130991978 |
| 原始查询 | LOC130991978 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | myosin heavy chain-like protein [Source:NCBI gene (formerly Entrezgene);Acc:836039]; symbol=AT5G59210; hit=AT5G59210; species=arabidopsis; confidence=high |
| 产物 | myosin heavy chain-like protein [Source:NCBI gene (formerly Entrezgene);Acc:836039]; symbol=AT5G59210; hit=AT5G59210; species=arabidopsis; confidence=high |
| Arabidopsis | AT5G59210 (AT5G59210)myosin heavy chain-like protein [Source:NCBI gene (formerly Entrezgene);Acc:836039] identity=63; qcov=1; evalue=0; confidence=high |
| Rice | Os03g0268100- identity=50.4; qcov=1.03; evalue=2.29e-138; confidence=high |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130991978 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Golgi apparatus | 高尔基体 | 1.00000 | XP_057772399.1 |
| 2 | Trans-golgi network | Trans-golgi network | 0.60000 | XP_057772399.1 |
| 3 | Cytoplasm | 细胞质 | 0.40000 | XP_057772399.1 |
| 4 | Centrosome | 中心体 | 0.40000 | XP_057772400.1 |
| 5 | Cytoskeleton | 细胞骨架 | 0.40000 | XP_057772400.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr7:5711185 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | B117,B122,B131,C2 |
Chr7:5711237 |
A |
AGC |
2bp_insertion | frameshift_variant | 1 | C7 |
Chr7:5711237 |
A |
AGC |
2bp_insertion | CDS_variant | 1 | C7 |
Chr7:5711243 |
C |
CAT |
2bp_insertion | frameshift_variant | 171 | A1,A10,A11,A13,A14,A16,A18,A20,A22,A23,A24,A25,A4,A7,A9,B10,B101,B103,B104,B105,B108,B110,B111,B113,B114,B117,B119,B12,B120,B121,B122,B123,B124,B126,B128,B129,B13,B130,B131,B132,B133,B134,B136,B139,B14,B15,B16,B18,B19,B21,B23,B24,B26,B30,B32,B36,B38,B39,B40,B41,B42,B43,B44,B48,B51,B52,B54,B55,B56,B58,B6,B60,B62,B63,B64,B65,B66,B68,B69,B7,B70,B71,B72,B73,B74,B75,B76,B77,B79,B8,B82,B83,B84,B85,B86,B87,B88,B89,B9,B90,B92,B93,B95,B96,B97,B98,B99,C1,C10,C11,C12,C14,C18,C19,C2,C21,C22,C24,C25,C26,C27,C28,C3,C32,C34,C36,C37,C39,C41,C43,C45,C47,C49,C5,C50,C53,C54,C55,C56,C57,C58,C59,C60,C61,C62,C64,C65,C66,C67,C68,C69,C70,C72,C73,C74,C76,C79,C80,C82,C83,C85,C86,C87,C9,D1,D10,D11,D3,D4,D7,D9 |
Chr7:5711246 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B117,B91,C52 |
Chr7:5711267 |
A |
ATG |
2bp_insertion | frameshift_variant | 9 | B128,B129,B30,B82,C3,C41,C61,C9,D1 |
Chr7:5711275 |
ACG |
A |
2bp_deletion | frameshift_variant | 21 | B128,B129,B30,B6,B63,B70,B77,B82,B83,B84,C11,C3,C41,C47,C53,C56,C61,C67,C69,C74,D1 |
Chr7:5712136 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | A8,B122,B81 |
Chr7:5712629 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B44 |
Chr7:5713190 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C7 |
Chr7:5713196 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C4 |
Chr7:5713417 |
C |
T |
EMS_canonical_SNV | CDS_variant | 5 | A18,B35,B37,C23,C85 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
2 records
下载 cDNA FASTA2 records
下载 CDS FASTA2 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。