当前解析结果
SmilChr07G000841| 统一新 Gene ID | SmilChr07G000841 |
|---|---|
| 名称 | SmilChr07G000841 |
| 描述 | uncharacterized SmilChr07G000841 |
| 染色体 / SeqID | Chr07 / NC_080393.1 |
| 坐标与链方向 | 5985669 - 5987754 / + |
| NCBI Gene ID | LOC130992012 |
|---|---|
| GeneID | 130992012 |
| locus_tag | - |
| NCBI Name | LOC130992012 |
| 原始查询 | LOC130992012 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | homeobox prospero protein [Source:NCBI gene (formerly Entrezgene);Acc:836009]; symbol=AT5G58920; hit=AT5G58920; species=arabidopsis; confidence=high |
| 产物 | homeobox prospero protein [Source:NCBI gene (formerly Entrezgene);Acc:836009]; symbol=AT5G58920; hit=AT5G58920; species=arabidopsis; confidence=high |
| Arabidopsis | AT5G58920 (AT5G58920)homeobox prospero protein [Source:NCBI gene (formerly Entrezgene);Acc:836009] identity=69; qcov=0.942; evalue=8.34e-76; confidence=high |
| Rice | Os01g0362000- identity=65.6; qcov=0.623; evalue=5.98e-42; confidence=medium |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130992012 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Mitochondrion | 线粒体 | 1.00000 | XP_057772448.1 |
| 2 | Mitochondrion membrane | 线粒体膜 | 1.00000 | XP_057772448.1 |
| 3 | Mitochondrion inner membrane | 线粒体内膜 | 1.00000 | XP_057772448.1 |
| 4 | Nucleus | 细胞核 | 0.00000 | XP_057772448.1 |
| 5 | Chromosome | 染色体 | 0.00000 | XP_057772448.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr7:5985840 |
TC |
T |
1bp_deletion | frameshift_variant | 1 | B14 |
Chr7:5985840 |
TC |
T |
1bp_deletion | CDS_variant | 1 | B14 |
Chr7:5986598 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B2 |
Chr7:5986629 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | B132,B85,C26,D7 |
Chr7:5986679 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B123,B45 |
Chr7:5986748 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B34 |
Chr7:5986917 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | A24,B140 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
2 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。