Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr07G000915`

染色体: Chr07 坐标: 6531613-6537448 链方向: - 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr07G000915`
名称	SmilChr07G000915
描述	uncharacterized SmilChr07G000915
染色体 / SeqID	Chr07 / NC_080393.1
坐标与链方向	6531613 - 6537448 / `-`

ID 对照

NCBI Gene ID	`LOC130992090`
GeneID	`130992090`
locus_tag	`-`
NCBI Name	`LOC130992090`
原始查询	`LOC130992090`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	PAP/OAS1 substrate-binding domain superfamily [Source:NCBI gene (formerly Entrezgene);Acc:824325]; symbol=AT3G51620; hit=AT3G51620; species=arabidopsis; confidence=low
产物	PAP/OAS1 substrate-binding domain superfamily [Source:NCBI gene (formerly Entrezgene);Acc:824325]; symbol=AT3G51620; hit=AT3G51620; species=arabidopsis; confidence=low
Arabidopsis	`AT3G51620` (AT3G51620) PAP/OAS1 substrate-binding domain superfamily [Source:NCBI gene (formerly Entrezgene);Acc:824325] identity=66.2; qcov=0.396; evalue=9.99e-152; confidence=low
Rice	`Os11g0114700` (OsNTP11) - identity=55.4; qcov=0.429; evalue=6.4e-130; confidence=low
GO	-
KEGG	-
Pfam	PF22600 (MTPAP-like_central); PF26180 (PAP-OAS1)
InterPro	-
eggNOG	-
NR	GeneID:130992090

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Cytoplasm	细胞质	0.80000	`XP_057772555.1`
2	Nucleus	细胞核	0.60000	`XP_057772555.1`
3	Cytosol	细胞质基质	0.60000	`XP_057772555.1`
4	Cytoplasmic granule	细胞质颗粒	0.20000	`XP_057772555.1`
5	Cytoplasmic ribonucleoprotein granule	Cytoplasmic ribonucleoprotein granule	0.20000	`XP_057772555.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr7:6532000`	`C`	`T`	EMS_canonical_SNV	CDS_variant	4	B121,B85,C81,D6
`Chr7:6532043`	`G`	`A`	EMS_canonical_SNV	CDS_variant	2	B125,B66
`Chr7:6532447`	`G`	`A`	EMS_canonical_SNV	CDS_variant	2	A13,D8
`Chr7:6532570`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B10
`Chr7:6532632`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	B87,D5
`Chr7:6532643`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	C83
`Chr7:6532718`	`C`	`T`	EMS_canonical_SNV	CDS_variant	4	B114,B137,B65,C60
`Chr7:6532728`	`G`	`A`	EMS_canonical_SNV	CDS_variant	3	B114,B137,B65
`Chr7:6532736`	`C`	`T`	EMS_canonical_SNV	CDS_variant	3	B14,B38,B39
`Chr7:6532971`	`C`	`T`	EMS_canonical_SNV	CDS_variant	5	A24,A9,C29,C60,C72
`Chr7:6533067`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	D11
`Chr7:6533151`	`C`	`T`	EMS_canonical_SNV	CDS_variant	4	B125,B51,B66,C42

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057772555.1

836 aa

418

836

MTPAP-like_central

PAP-OAS1

PF22600 MTPAP-like_central 51-171 aa PF26180 PAP-OAS1 183-375 aa

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057772555.1`	Pfam	`PF22600`	MTPAP-like_central	Domain	51	171	7.5e-09	36.5	Poly(A) RNA polymerase, mitochondrial-like, central palm domain
`XP_057772555.1`	Pfam	`PF26180`	PAP-OAS1	Domain	183	375	2.7e-96	321.6	PAP/OAS1 substrate-binding domain

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

2 records

下载 cDNA FASTA

XR_009091245.1
CTCTTCGTCGCGTCCCAATTTTCTGCCGCGCCATTTGTAGATTTTTTTTTCACGACGAAAAGAGGAGAGAGAGGGAGAGAGAAAATCCAAATCTAGACGTGCGCATATACATATACTTAGTTACATATACAGGCGCACGCAAACATGTATATGTAGAGAGAGAGCGAGGAAGGTGAAGACGGTTTTGCTTTGGTTTTTGTGTCTCTCTGCAAATAACTGAAAAAGGAAGGAGAGATTTAGAGGATGATGAATTCGAGCAT...

XM_057916572.1
CTCTTCGTCGCGTCCCAATTTTCTGCCGCGCCATTTGTAGATTTTTTTTTCACGACGAAAAGAGGAGAGAGAGGGAGAGAGAAAATCCAAATCTAGACGTGCGCATATACATATACTTAGTTACATATACAGGCGCACGCAAACATGTATATGTAGAGAGAGAGCGAGGAAGGTGAAGACGGTTTTGCTTTGGTTTTTGTGTCTCTCTGCAAATAACTGAAAAAGGAAGGAGAGATTTAGAGGATGATGAATTCGAGCAT...

CDS

1 records

下载 CDS FASTA

LOC130992090
ATGAGATCGAAAATGGGTGAGCTGAACTCCGAAGGTGACGTTTTGGCGGTGGAGAAGCGGGCGGATTTTGGCTCGGTGTGGAAGGCGTCTCCTCCGGCTGATCCGGCGTTGATTAGTGAGGAATGTTTGTCTGCGGCGGGGGAAGCGGCGGAGCAAGTGTTGAATTGCGTACACCCCACACTCGACTCGGAGGAGAAGAGGAGAGACGTCATTGATTACGTTCAGCAACTCGTCAAGAGTCATTTGAATTGCGAGGTTGT...

Protein

1 records

下载 Protein FASTA

XP_057772555.1
MRSKMGELNSEGDVLAVEKRADFGSVWKASPPADPALISEECLSAAGEAAEQVLNCVHPTLDSEEKRRDVIDYVQQLVKSHLNCEVVPYGSVPLKTYLPDGDIDLTILKGPNAEESLPHDVLSLLEAEEQNENAEYQVKDTQLIDAEVKLVKCFVQNIVVDVTFNQLGGLSTLCFLEQVDRLVGRNHVFKRSIILVKAWCYYESRILGAHYGLISTYALETLVLYIFHFFHSSLSSPLSVLYRFLDYYSQFDWDNYCISL...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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