Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr07G000947`

染色体: Chr07 坐标: 6774247-6781052 链方向: - 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr07G000947`
名称	SmilChr07G000947
描述	probable LRR receptor-like serine/threonine-protein kinase At1g06840
染色体 / SeqID	Chr07 / NC_080393.1
坐标与链方向	6774247 - 6781052 / `-`

ID 对照

NCBI Gene ID	`LOC130992105`
GeneID	`130992105`
locus_tag	`-`
NCBI Name	`LOC130992105`
原始查询	`LOC130992105`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	probable LRR receptor-like serine/threonine-protein kinase At1g06840
产物	probable LRR receptor-like serine/threonine-protein kinase At1g06840
Arabidopsis	`AT1G06840` (AT1G06840) Leucine-rich repeat protein kinase family protein [Source:NCBI gene (formerly Entrezgene);Acc:837196] identity=65; qcov=0.979; evalue=0; confidence=high
Rice	`Os01g0960400` (P0401G10.25-1) - identity=61.9; qcov=0.988; evalue=0; confidence=high
GO	GO:0004672 (protein kinase activity); GO:0005515 (protein binding); GO:0005524 (ATP binding); GO:0006468 (protein phosphorylation)
KEGG	-
Pfam	PF00069 (Pkinase); PF00560 (LRR_1); PF07714 (PK_Tyr_Ser-Thr); PF08263 (LRRNT_2); PF13855 (LRR_8); PF23180 (ALE2_N); PF23598 (LRR_14)
InterPro	-
eggNOG	-
NR	GeneID:130992105

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Cell membrane	细胞膜	1.00000	`XP_057772584.1`
2	Nucleus	细胞核	0.00000	`XP_057772584.1`
3	Chromosome	染色体	0.00000	`XP_057772584.1`
4	Centromere	着丝粒	0.00000	`XP_057772584.1`
5	Chromatin	染色质	0.00000	`XP_057772584.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr7:6774560`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B51
`Chr7:6774562`	`C`	`T`	EMS_canonical_SNV	CDS_variant	5	B18,B23,B97,C53,C54
`Chr7:6774589`	`G`	`A`	EMS_canonical_SNV	CDS_variant	3	B106,B108,B75
`Chr7:6774762`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	C5
`Chr7:6775008`	`C`	`T`	EMS_canonical_SNV	CDS_variant	5	B18,B23,B97,C53,C54
`Chr7:6775786`	`G`	`A`	EMS_canonical_SNV	CDS_variant	5	A25,B113,B130,B84,C18
`Chr7:6776058`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	D6
`Chr7:6776087`	`G`	`A`	EMS_canonical_SNV	CDS_variant	5	B14,B34,B80,C13,C37
`Chr7:6776094`	`G`	`A`	EMS_canonical_SNV	CDS_variant	2	A21,B101
`Chr7:6776139`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	C26
`Chr7:6776332`	`G`	`A`	EMS_canonical_SNV	CDS_variant	3	B122,B137,C39
`Chr7:6776379`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B46

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057772584.1

956 aa

478

956

LRRNT_2

LRR_14

LRR_1

LRR_8

LRR_1

ALE2_N

Pkinase

PK_Tyr_Ser-Thr

PF08263 LRRNT_2 38-76 aa PF23598 LRR_14 85-290 aa PF00560 LRR_1 112-132 aa PF00560 LRR_1 136-157 aa PF00560 LRR_1 207-229 aa PF13855 LRR_8 279-336 aa PF00560 LRR_1 302-324 aa PF23180 ALE2_N 433-543 aa PF00069 Pkinase 628-893 aa PF07714 PK_Tyr_Ser-Thr 631-896 aa

XP_057772585.1

956 aa

478

956

LRRNT_2

LRR_14

LRR_1

LRR_8

LRR_1

ALE2_N

Pkinase

PK_Tyr_Ser-Thr

XP_057772586.1

956 aa

478

956

LRRNT_2

LRR_14

LRR_1

LRR_8

LRR_1

ALE2_N

Pkinase

PK_Tyr_Ser-Thr

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057772584.1`	Pfam	`PF08263`	LRRNT_2	Family	38	76	6.5e-08	33.4	Leucine rich repeat N-terminal domain
`XP_057772584.1`	Pfam	`PF23598`	LRR_14	Repeat	85	290	5.7e-12	45.8	Leucine-rich repeat region
`XP_057772584.1`	Pfam	`PF00560`	LRR_1	Repeat	112	132	9.3e-21	70.2	Leucine Rich Repeat
`XP_057772584.1`	Pfam	`PF00560`	LRR_1	Repeat	136	157	9.3e-21	70.2	Leucine Rich Repeat
`XP_057772584.1`	Pfam	`PF00560`	LRR_1	Repeat	207	229	9.3e-21	70.2	Leucine Rich Repeat
`XP_057772584.1`	Pfam	`PF13855`	LRR_8	Repeat	279	336	3.7e-16	59.4	Leucine rich repeat
`XP_057772584.1`	Pfam	`PF00560`	LRR_1	Repeat	302	324	9.3e-21	70.2	Leucine Rich Repeat
`XP_057772584.1`	Pfam	`PF23180`	ALE2_N	Domain	433	543	4e-07	30.9	Receptor-like PK ALE2 N-terminal domain
`XP_057772584.1`	Pfam	`PF00069`	Pkinase	Domain	628	893	1.5e-46	159.6	Protein kinase domain
`XP_057772584.1`	Pfam	`PF07714`	PK_Tyr_Ser-Thr	Domain	631	896	4.1e-45	154.8	Protein tyrosine and serine/threonine kinase
`XP_057772585.1`	Pfam	`PF08263`	LRRNT_2	Family	38	76	6.5e-08	33.4	Leucine rich repeat N-terminal domain
`XP_057772585.1`	Pfam	`PF23598`	LRR_14	Repeat	85	290	5.7e-12	45.8	Leucine-rich repeat region
`XP_057772585.1`	Pfam	`PF00560`	LRR_1	Repeat	112	132	9.3e-21	70.2	Leucine Rich Repeat
`XP_057772585.1`	Pfam	`PF00560`	LRR_1	Repeat	136	157	9.3e-21	70.2	Leucine Rich Repeat
`XP_057772585.1`	Pfam	`PF00560`	LRR_1	Repeat	207	229	9.3e-21	70.2	Leucine Rich Repeat
`XP_057772585.1`	Pfam	`PF13855`	LRR_8	Repeat	279	336	3.7e-16	59.4	Leucine rich repeat
`XP_057772585.1`	Pfam	`PF00560`	LRR_1	Repeat	302	324	9.3e-21	70.2	Leucine Rich Repeat
`XP_057772585.1`	Pfam	`PF23180`	ALE2_N	Domain	433	543	4e-07	30.9	Receptor-like PK ALE2 N-terminal domain
`XP_057772585.1`	Pfam	`PF00069`	Pkinase	Domain	628	893	1.5e-46	159.6	Protein kinase domain
`XP_057772585.1`	Pfam	`PF07714`	PK_Tyr_Ser-Thr	Domain	631	896	4.1e-45	154.8	Protein tyrosine and serine/threonine kinase
`XP_057772586.1`	Pfam	`PF08263`	LRRNT_2	Family	38	76	6.5e-08	33.4	Leucine rich repeat N-terminal domain
`XP_057772586.1`	Pfam	`PF23598`	LRR_14	Repeat	85	290	5.7e-12	45.8	Leucine-rich repeat region
`XP_057772586.1`	Pfam	`PF00560`	LRR_1	Repeat	112	132	9.3e-21	70.2	Leucine Rich Repeat
`XP_057772586.1`	Pfam	`PF00560`	LRR_1	Repeat	136	157	9.3e-21	70.2	Leucine Rich Repeat
`XP_057772586.1`	Pfam	`PF00560`	LRR_1	Repeat	207	229	9.3e-21	70.2	Leucine Rich Repeat
`XP_057772586.1`	Pfam	`PF13855`	LRR_8	Repeat	279	336	3.7e-16	59.4	Leucine rich repeat
`XP_057772586.1`	Pfam	`PF00560`	LRR_1	Repeat	302	324	9.3e-21	70.2	Leucine Rich Repeat
`XP_057772586.1`	Pfam	`PF23180`	ALE2_N	Domain	433	543	4e-07	30.9	Receptor-like PK ALE2 N-terminal domain
`XP_057772586.1`	Pfam	`PF00069`	Pkinase	Domain	628	893	1.5e-46	159.6	Protein kinase domain
`XP_057772586.1`	Pfam	`PF07714`	PK_Tyr_Ser-Thr	Domain	631	896	4.1e-45	154.8	Protein tyrosine and serine/threonine kinase

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

3 records

下载 cDNA FASTA

XM_057916602.1
TCAAACCACTTCTTCCCACCGAAGTGTAGTTTCCACTTCTGGAAAATATTGAAGAACATACTCTTTCAACATTCTCAATTCTTGCTGCCAAATTTGATATGTACAGATTAGCTAGCTGTGAGAAAATTGCTCAAACCAATAATCTTAATGTGAACTGGGAAGATTCCATTATTTCTCTCTCTCAAATTTCAATAATCATTGATCGCACAGTGCAATTAGAAGTTGAAGAAAGGGCAGTTGAACAACTACTCCTCATCAAA...

XM_057916601.1
AAATATTGAAGAACATACTCTTTCAACATTCTCAATTCTTGCTGCCAAATTTGATATGTACAGATTAGCTAGCTGTGAGAAAATTGCTCAAACCAATAATCTTAATGTGAACTGGGAAGATTCCATTATTTCTCTCTCTCAAATTTCAATAATCATTGATCGCACAGTGCAATTAGAAGTTGAAGAAAGGGCAGTTGAACAACTACTCCTCATCAAAAGTCAATAAAGCCAATCCCCATTAATCCCAATAAAATATACCA...

CDS

3 records

下载 CDS FASTA

LOC130992105
ATGGTGATTTTCGGGGTGTCCCAGCTGAGTGCTTCGAATCTTAGATTGATTCTGGTTATGTGTTTATGCTGGTGTCTGTTGGTTACTGGTGCTGATAGCCAACGCACAGATCCAAATGAAGTGAATGCATTGAGAGCTATCAAGAGAAGTTTGAGTGATCCTTTCAATAATCTTGTCCGGTGGGACAGGGGGGATCCGTGCATTTTGAATTGGACGGGGATTATCTGCTATAACACAACGCTTCGTGATGGTCAATTTCA...

Protein

3 records

下载 Protein FASTA

XP_057772584.1
MVIFGVSQLSASNLRLILVMCLCWCLLVTGADSQRTDPNEVNALRAIKRSLSDPFNNLVRWDRGDPCILNWTGIICYNTTLRDGQFHVSEVLFMGRNLTGTLSPELGRLSYLKILDFMWNNITGTIPKEIGNITTLELLLLNGNQLTGSLPEELGNLVNLDRIQIDQNFISGPIPSSFANLDKAKHFHMNNNSLSGQIPPVLSRLPNLVHLLLDNNNLSGPLPPELSQMPNLLILQLDNNNFGGSTIPSSYGNISTLLKL...

XP_057772585.1
MVIFGVSQLSASNLRLILVMCLCWCLLVTGADSQRTDPNEVNALRAIKRSLSDPFNNLVRWDRGDPCILNWTGIICYNTTLRDGQFHVSEVLFMGRNLTGTLSPELGRLSYLKILDFMWNNITGTIPKEIGNITTLELLLLNGNQLTGSLPEELGNLVNLDRIQIDQNFISGPIPSSFANLDKAKHFHMNNNSLSGQIPPVLSRLPNLVHLLLDNNNLSGPLPPELSQMPNLLILQLDNNNFGGSTIPSSYGNISTLLKL...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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