Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr07G000927`

染色体: Chr07 坐标: 6613962-6618036 链方向: - 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr07G000927`
名称	SmilChr07G000927
描述	protein NETWORKED 4A-like
染色体 / SeqID	Chr07 / NC_080393.1
坐标与链方向	6613962 - 6618036 / `-`

ID 对照

NCBI Gene ID	`LOC130992119`
GeneID	`130992119`
locus_tag	`-`
NCBI Name	`LOC130992119`
原始查询	`LOC130992119`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	protein NETWORKED 4A-like
产物	protein NETWORKED 4A-like
Arabidopsis	`AT5G58320` (NET4A) Kinase interacting (KIP1-like) family protein [Source:NCBI gene (formerly Entrezgene);Acc:835944] identity=38.6; qcov=0.998; evalue=3.98e-112; confidence=medium
Rice	`Os01g0168100` (P0028E10.16) - identity=35.1; qcov=1.04; evalue=4.24e-89; confidence=medium
GO	GO:0003779 (actin binding); GO:0005774 (vacuolar membrane)
KEGG	-
Pfam	PF07765 (KIP1)
InterPro	-
eggNOG	-
NR	GeneID:130992119

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Trans-golgi network	Trans-golgi network	0.40000	`XP_057772606.1`
2	Nucleus	细胞核	0.20000	`XP_057772606.1`
3	Nucleus membrane	核膜	0.20000	`XP_057772606.1`
4	Cytoplasm	细胞质	0.20000	`XP_057772606.1`
5	Cytosol	细胞质基质	0.20000	`XP_057772606.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr7:6614221`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	C58
`Chr7:6614242`	`G`	`A`	EMS_canonical_SNV	CDS_variant	2	B6,C67
`Chr7:6614322`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	D10
`Chr7:6614342`	`C`	`T`	EMS_canonical_SNV	CDS_variant	4	C12,C43,C46,C76
`Chr7:6614383`	`G`	`A`	EMS_canonical_SNV	CDS_variant	5	A10,A24,B22,C32,C68
`Chr7:6614456`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B114
`Chr7:6614476`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B91
`Chr7:6614491`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B95
`Chr7:6614497`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	D10
`Chr7:6614520`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B114
`Chr7:6614547`	`G`	`A`	EMS_canonical_SNV	CDS_variant	2	B75,C14
`Chr7:6614551`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	C14

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057772606.1

620 aa

310

620

KIP1

PF07765 KIP1 21-94 aa

XP_057772607.1

620 aa

310

620

KIP1

PF07765 KIP1 21-94 aa

XP_057772608.1

620 aa

310

620

KIP1

PF07765 KIP1 21-94 aa

XP_057772609.1

620 aa

310

620

KIP1

PF07765 KIP1 21-94 aa

XP_057772610.1

620 aa

310

620

KIP1

PF07765 KIP1 21-94 aa

XP_057772611.1

620 aa

310

620

KIP1

PF07765 KIP1 21-94 aa

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057772606.1`	Pfam	`PF07765`	KIP1	Family	21	94	3.9e-37	126.9	KIP1-like protein
`XP_057772607.1`	Pfam	`PF07765`	KIP1	Family	21	94	3.9e-37	126.9	KIP1-like protein
`XP_057772608.1`	Pfam	`PF07765`	KIP1	Family	21	94	3.9e-37	126.9	KIP1-like protein
`XP_057772609.1`	Pfam	`PF07765`	KIP1	Family	21	94	3.9e-37	126.9	KIP1-like protein
`XP_057772610.1`	Pfam	`PF07765`	KIP1	Family	21	94	3.9e-37	126.9	KIP1-like protein
`XP_057772611.1`	Pfam	`PF07765`	KIP1	Family	21	94	3.9e-37	126.9	KIP1-like protein

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

6 records

下载 cDNA FASTA

XM_057916626.1
GGACGCTCCTCAAATCATGCCCAATGCAACTTTGTGTCTTTGTCCAATCTCATCTCTCTAATTATAATTTTGTATTTTTCGAATTGATCGCTGTTCTATATAGTTTTATTTTCTAAATCAAATCAAATTTATAATGAAAATTCGTCTCAAAAAAATTTATGATTGAATTTGAAATGGATAAATCAGATGAGAAAAAGCTTTGACTTAATACCAATCTCCATGTGACGAAAACTTCAGACACGGCGCTCTCTCTCTCTCTC...

XM_057916623.1
AATCAGATGAGAAAAAGCTTTGACTTAATACCAATCTCCATGTGACGAAAACTTCAGACACGGCGCTCTCTCTCTCTCTCTACAGATAGATTTAAACACACAGTGCTGAGTGCCCCCTACACCTACAGCTAAAAACTAAAAAACAAGGAATCTCCATATTTTCATACACAACATCTGTCTCTCTTGCCGGAGCTTCACAATTTTGTTCTTTTTCATAGGTTTCGCCGCCTTCTCTCTCTCTCATTTTCCATATTTGTACA...

CDS

6 records

下载 CDS FASTA

LOC130992119
ATGTCTTCATCACACGTTAAGTATAACAAAATGAAGAGGTTGGAATCAAAGAAGTCTCACTCGTGGTGGTGGGATAGCCATGTTAGTCCCAAGAATTCGAAATGGCTACAAGAAAATCTTGATGACATGGATCAGAATGTCAAAAGGATGTTGAAACTAATAGAAGAGGATGCTGATTCCTTCGCAAAGAAGGCTGAATTGTATTTCAAGAAGCGGCCCGAGCTGGTCGGTCTCGTTGAGGAGTTTTATCGAATGTACCG...

Protein

6 records

下载 Protein FASTA

XP_057772606.1
MSSSHVKYNKMKRLESKKSHSWWWDSHVSPKNSKWLQENLDDMDQNVKRMLKLIEEDADSFAKKAELYFKKRPELVGLVEEFYRMYRALAERYDHVTGELKKNIPSDLRSQGSGVSDVGSEPPFTVPSPDTKPARTKSGPRAAGFEFFLGSNGSGSDLNSKEGDESSTLDSESESDDSSVNNYSSTQSNSEEVGSRRRVIELEAELHEVKEKLRLQTEEISIGSKQCSHECSEINLAKLAAYEEELRVAKENMEESKEEI...

XP_057772607.1
MSSSHVKYNKMKRLESKKSHSWWWDSHVSPKNSKWLQENLDDMDQNVKRMLKLIEEDADSFAKKAELYFKKRPELVGLVEEFYRMYRALAERYDHVTGELKKNIPSDLRSQGSGVSDVGSEPPFTVPSPDTKPARTKSGPRAAGFEFFLGSNGSGSDLNSKEGDESSTLDSESESDDSSVNNYSSTQSNSEEVGSRRRVIELEAELHEVKEKLRLQTEEISIGSKQCSHECSEINLAKLAAYEEELRVAKENMEESKEEI...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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