当前解析结果
SmilChr07G000953| 统一新 Gene ID | SmilChr07G000953 |
|---|---|
| 名称 | SmilChr07G000953 |
| 描述 | acyl-coenzyme A thioesterase 2, chloroplastic-like |
| 染色体 / SeqID | Chr07 / NC_080393.1 |
| 坐标与链方向 | 6842924 - 6845881 / + |
| NCBI Gene ID | LOC130992141 |
|---|---|
| GeneID | 130992141 |
| locus_tag | - |
| NCBI Name | LOC130992141 |
| 原始查询 | LOC130992141 |
| 来源 | GFF basic annotation; NCBI GO GAF; Arabidopsis/Rice homolog |
|---|---|
| 描述 | acyl-coenzyme A thioesterase 2, chloroplastic-like |
| 产物 | acyl-coenzyme A thioesterase 2%2C chloroplastic-like |
| Arabidopsis | AT5G48370 (AT5G48370)Thioesterase/thiol ester dehydrase-isomerase superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:834890] identity=73; qcov=0.993; evalue=0; confidence=high |
| Rice | Os09g0517700- identity=69.8; qcov=0.972; evalue=0; confidence=high |
| GO | GO:0006637 (acyl-CoA metabolic process); GO:0047617 (fatty acyl-CoA hydrolase activity) |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130992141 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Cytosol | 细胞质基质 | 1.00000 | XP_057772650.1 |
| 2 | Peroxisome | 过氧化物酶体 | 0.60000 | XP_057772650.1 |
| 3 | Nucleus | 细胞核 | 0.00000 | XP_057772650.1 |
| 4 | Chromosome | 染色体 | 0.00000 | XP_057772650.1 |
| 5 | Centromere | 着丝粒 | 0.00000 | XP_057772650.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr7:6843059 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B10,D1 |
Chr7:6843210 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | A1 |
Chr7:6844368 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | C37,D10 |
Chr7:6844655 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B110 |
Chr7:6844797 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B118,C39,D7 |
Chr7:6845559 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B118,C39,D7 |
Chr7:6845577 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | A1 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。