Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr07G001110`

染色体: Chr07 坐标: 8193649-8196702 链方向: + 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr07G001110`
名称	SmilChr07G001110
描述	palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic-like
染色体 / SeqID	Chr07 / NC_080393.1
坐标与链方向	8193649 - 8196702 / `+`

ID 对照

NCBI Gene ID	`LOC130992285`
GeneID	`130992285`
locus_tag	`-`
NCBI Name	`LOC130992285`
原始查询	`LOC130992285`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic-like
产物	palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase%2C chloroplastic-like
Arabidopsis	`AT3G15850` (FAD5) fatty acid desaturase 5 [Source:NCBI gene (formerly Entrezgene);Acc:820828] identity=60.9; qcov=1.02; evalue=1.94e-128; confidence=high
Rice	`-` -
GO	GO:0005789 (endoplasmic reticulum membrane); GO:0006629 (lipid metabolic process); GO:0009979 (GO:0009979); GO:0016717 (oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water)
KEGG	-
Pfam	PF00487 (FA_desaturase)
InterPro	-
eggNOG	-
NR	GeneID:130992285

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Endoplasmic reticulum	内质网	1.00000	`XP_057772832.1`
2	Endoplasmic reticulum membrane	内质网膜	1.00000	`XP_057772832.1`
3	Nucleus	细胞核	0.00000	`XP_057772832.1`
4	Chromosome	染色体	0.00000	`XP_057772832.1`
5	Centromere	着丝粒	0.00000	`XP_057772832.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr7:8193738`	`G`	`A`	EMS_canonical_SNV	CDS_variant	2	C33,C46
`Chr7:8193763`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	C1
`Chr7:8193894`	`C`	`T`	EMS_canonical_SNV	CDS_variant	3	B75,C33,C46
`Chr7:8194011`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	C33,C46
`Chr7:8194198`	`C`	`T`	EMS_canonical_SNV	CDS_variant	4	B11,B6,C21,C67
`Chr7:8194440`	`G`	`A`	EMS_canonical_SNV	CDS_variant	3	B12,B130,B55
`Chr7:8194501`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	D10
`Chr7:8195431`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	D6
`Chr7:8196398`	`AC`	`A`	1bp_deletion	frameshift_variant	10	B104,B38,B39,B72,B90,C21,C25,C83,D10,D11
`Chr7:8196409`	`A`	`AAT`	2bp_insertion	frameshift_variant	3	B110,B72,C14
`Chr7:8196409`	`A`	`AAT`	2bp_insertion	CDS_variant	3	B110,B72,C14
`Chr7:8196433`	`TAA`	`T`	2bp_deletion	frameshift_variant	143	A10,A14,A15,A16,A18,A19,A2,A21,A24,A25,A3,A5,A6,A8,B1,B10,B100,B101,B102,B105,B106,B107,B11,B111,B112,B113,B115,B118,B12,B121,B122,B123,B124,B125,B126,B128,B129,B13,B130,B131,B132,B133,B136,B139,B140,B16,B19,B20,B21,B22,B23,B24,B25,B27,B28,B29,B33,B34,B35,B36,B37,B38,B39,B40,B44,B45,B47,B48,B50,B51,B56,B57,B58,B59,B62,B65,B67,B68,B7,B71,B75,B76,B78,B8,B81,B82,B83,B85,B89,B9,B90,B92,B94,B95,B96,B98,B99,C12,C18,C20,C22,C29,C3,C30,C32,C33,C34,C37,C38,C39,C4,C43,C44,C45,C46,C47,C48,C50,C51,C53,C54,C58,C59,C6,C60,C61,C63,C65,C68,C74,C76,C78,C8,C84,C86,C9,D1,D11,D2,D3,D5,D7,D8

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057772832.1

329 aa

164

329

FA_desaturase

PF00487 FA_desaturase 73-285 aa

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057772832.1`	Pfam	`PF00487`	FA_desaturase	Domain	73	285	3e-18	67.2	Fatty acid desaturase

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

2 records

下载 cDNA FASTA

XM_057916849.1
CTAGCACCCAACATAACTCAAGCCTAGCCAATAAGAATGAGTCTCTTGGTGCCACAAATGTGTGGGGATGAGAAAGATACACACTTTGGGAGAATTGTGCTGTCAGATGTGGTGGTGACGAGGAAGAGGAATGTGTTTTGGGGCAGAAAGTGGAATTCTTTAGATATTGGGATAGTTTTTGTGGTGGCGGCTTTGCATTTGTTGTGTGTTTTAGCTCCTTCCACATTCAACTGGGGCGCCTTTGGCGTTGCAGTTGGATT...

XM_057916850.1
CTAGCACCCAACATAACTCAAGCCTAGCCAATAAGAATGAGTCTCTTGGTGCCACAAATGTGTGGGGATGAGAAAGATACACACTTTGGGAGAATTGTGCTGTCAGATGTGGTGGTGACGAGGAAGAGGAATGTGTTTTGGGGCAGAAAGTGGAATTCTTTAGATATTGGGATAGTTTTTGTGGTGGCGGCTTTGCATTTGTTGTGTGTTTTAGCTCCTTCCACATTCAACTGGGGCGCCTTTGGCGTTGCAGTTGGATT...

CDS

2 records

下载 CDS FASTA

LOC130992285
ATGAGTCTCTTGGTGCCACAAATGTGTGGGGATGAGAAAGATACACACTTTGGGAGAATTGTGCTGTCAGATGTGGTGGTGACGAGGAAGAGGAATGTGTTTTGGGGCAGAAAGTGGAATTCTTTAGATATTGGGATAGTTTTTGTGGTGGCGGCTTTGCATTTGTTGTGTGTTTTAGCTCCTTCCACATTCAACTGGGGCGCCTTTGGCGTTGCAGTTGGATTGTATGTCATTACTGGACTTCTTGGAATCACTCTCTC...

Protein

2 records

下载 Protein FASTA

XP_057772832.1
MSLLVPQMCGDEKDTHFGRIVLSDVVVTRKRNVFWGRKWNSLDIGIVFVVAALHLLCVLAPSTFNWGAFGVAVGLYVITGLLGITLSFHRNLSHRSFKLPKWLEYFFAYCGSLALQGNPIEWVSTHRYHHQFVDTEKDPHSPIEGFWFSHMSWLFDTDNVAQKCGETNNVGDLEKQPFYKFLQKTYILHHVALGALLYAMGGFPYIVWGMGVRIVWLYHITWQVNSACHIWGRQAWNTGDLSRNNWWVAVLAFGEGWHNN...

XP_057772833.1
MSLLVPQMCGDEKDTHFGRIVLSDVVVTRKRNVFWGRKWNSLDIGIVFVVAALHLLCVLAPSTFNWGAFGVAVGLYVITGLLGITLSFHRNLSHRSFKLPKWLEYFFAYCGSLALQGNPIEWVSTHRYHHQFVDTEKDPHSPIEGFWFSHMSWLFDTDNVAQKCGETNNVGDLEKQPFYKFLQKTYILHHVALGALLYAMGGFPYIVWGMGVRIVWLYHITWQVNSACHIWGRQAWNTGDLSRNNWLLEAVGLATRIKLS...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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