Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr07G001230`

染色体: Chr07 坐标: 9434332-9436398 链方向: - 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr07G001230`
名称	SmilChr07G001230
描述	trihelix transcription factor ENAP1-like
染色体 / SeqID	Chr07 / NC_080393.1
坐标与链方向	9434332 - 9436398 / `-`

ID 对照

NCBI Gene ID	`LOC130992408`
GeneID	`130992408`
locus_tag	`-`
NCBI Name	`LOC130992408`
原始查询	`LOC130992408`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	trihelix transcription factor ENAP1-like
产物	trihelix transcription factor ENAP1-like
Arabidopsis	`AT3G24490` (AT3G24490) Alcohol dehydrogenase transcription factor Myb/SANT-like family protein [Source:NCBI gene (formerly Entrezgene);Acc:822039] identity=47.4; qcov=0.73; evalue=6.5e-71; confidence=high
Rice	`Os01g0718900` - identity=33.9; qcov=0.686; evalue=1.66e-33; confidence=low
GO	GO:0000976 (transcription cis-regulatory region binding); GO:0005634 (nucleus)
KEGG	-
Pfam	PF10545 (MADF_DNA_bdg); PF12776 (Myb_DNA-bind_3); PF13837 (Myb_DNA-bind_4)
InterPro	-
eggNOG	-
NR	GeneID:130992408

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Nucleus	细胞核	1.00000	`XP_057773016.1`
2	Chromosome	染色体	0.00000	`XP_057773016.1`
3	Centromere	着丝粒	0.00000	`XP_057773016.1`
4	Chromatin	染色质	0.00000	`XP_057773016.1`
5	Telomere	端粒	0.00000	`XP_057773016.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr7:9434605`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B104
`Chr7:9434737`	`C`	`T`	EMS_canonical_SNV	CDS_variant	4	B140,B44,B74,C14
`Chr7:9434853`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	C6
`Chr7:9434887`	`C`	`T`	EMS_canonical_SNV	CDS_variant	4	A2,B131,B56,B96
`Chr7:9435025`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	A7,B72
`Chr7:9435059`	`G`	`A`	EMS_canonical_SNV	CDS_variant	2	B72,C25
`Chr7:9435161`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B66
`Chr7:9435379`	`CAA`	`C`	2bp_deletion	frameshift_variant	9	A14,A18,A22,A8,B129,B138,B6,C38,C41
`Chr7:9435446`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	D11

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057773016.1

344 aa

172

344

Myb_DNA-bind_4

Myb_DNA-bind_3

MADF_DNA_bdg

PF13837 Myb_DNA-bind_4 118-205 aa PF12776 Myb_DNA-bind_3 119-181 aa PF10545 MADF_DNA_bdg 140-203 aa

XP_057773017.1

344 aa

172

344

Myb_DNA-bind_4

Myb_DNA-bind_3

MADF_DNA_bdg

PF13837 Myb_DNA-bind_4 118-205 aa PF12776 Myb_DNA-bind_3 119-181 aa PF10545 MADF_DNA_bdg 140-203 aa

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057773016.1`	Pfam	`PF13837`	Myb_DNA-bind_4	Domain	118	205	1.2e-19	71.2	Myb/SANT-like DNA-binding domain
`XP_057773016.1`	Pfam	`PF12776`	Myb_DNA-bind_3	Domain	119	181	7e-05	24.4	Myb/SANT-like DNA-binding domain
`XP_057773016.1`	Pfam	`PF10545`	MADF_DNA_bdg	Domain	140	203	6.4e-06	27.1	Alcohol dehydrogenase transcription factor Myb/SANT-like
`XP_057773017.1`	Pfam	`PF13837`	Myb_DNA-bind_4	Domain	118	205	1.2e-19	71.2	Myb/SANT-like DNA-binding domain
`XP_057773017.1`	Pfam	`PF12776`	Myb_DNA-bind_3	Domain	119	181	7e-05	24.4	Myb/SANT-like DNA-binding domain
`XP_057773017.1`	Pfam	`PF10545`	MADF_DNA_bdg	Domain	140	203	6.4e-06	27.1	Alcohol dehydrogenase transcription factor Myb/SANT-like

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

2 records

下载 cDNA FASTA

XM_057917033.1
GCTGGCCCCGCCTAATCTACGGAGTCAAAAATGAAGGTAAATGCTCCAAATTTTAACATTGGTGGGTGGGATCCACGCAGTGTCGGGTAAGAAATCGAATCCACAGCGCAGTTTAGTAACGCCTGCTGCTTTACATTCCTCGTCGTCTATCGTGCACCGCCCCTACTCACAAGCATGCGTCTCTTTCCCCTATCCTGTAATTCAACAACTCAATTCATTACATTTCACGTGGGACTCAATCCTGTTTCCCTCTTATTTTA...

XM_057917034.1
AGAAATCGAATCCACAGCGCAGTTTAGTAACGCCTGCTGCTTTACATTCCTCGTCGTCTATCGTGCACCGCCCCTACTCACAAGCATGCGTCTCTTTCCCCTATCCTGTAATTCAACAACTCAATTCATTACATTTCACGTGGGACTCAATCCTGTTTCCCTCTTATTTTATCTTTCTCAGCTCCATATTACATCCGTTTCCCATTCTTTCCGCTGATTTCAGTCTTCTTTTCCGGAAAGTTTGAGTCTTGGAAGCATTC...

CDS

2 records

下载 CDS FASTA

LOC130992408
ATGAGTGATGAGGATGATAACATGTGCCTAATAAATGGGGGAAAGTTTCCTAATCAAGATATCAGTTATCCTCAAAATGTTGGGAAATCATACATTGATGTGGAGGATGATGAAGACGATGACGATGGAGGAGATGGTGTTGAGAGGATAGGTAAAGATGATTATGGAGGTGGCGATGAGGATGAGACGACGGATGATGATGAATCCGGTGATCTTCAGAGGCATCCGAAGAAGAGGAAACTCAAAACCACCCTGTTGTC...

Protein

2 records

下载 Protein FASTA

XP_057773016.1
MSDEDDNMCLINGGKFPNQDISYPQNVGKSYIDVEDDEDDDDGGDGVERIGKDDYGGGDEDETTDDDESGDLQRHPKKRKLKTTLLSSYEFAPRLPASSPGSAPVPKPSYGGRNPLLDWTERETSVLLDAWGERYLKRGRKSLRSEEWQEVSEKVSQGSQIERTDTQCRNRLDTLKKKYKKEKVKLGEGGSVACKWIYFNKMDTLLSTPPQQAGGLSCGMESGEYVFTNPKVYLNQSNGLDEMRDSPGNSESGGDGEDES...

XP_057773017.1
MSDEDDNMCLINGGKFPNQDISYPQNVGKSYIDVEDDEDDDDGGDGVERIGKDDYGGGDEDETTDDDESGDLQRHPKKRKLKTTLLSSYEFAPRLPASSPGSAPVPKPSYGGRNPLLDWTERETSVLLDAWGERYLKRGRKSLRSEEWQEVSEKVSQGSQIERTDTQCRNRLDTLKKKYKKEKVKLGEGGSVACKWIYFNKMDTLLSTPPQQAGGLSCGMESGEYVFTNPKVYLNQSNGLDEMRDSPGNSESGGDGEDES...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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