当前解析结果
SmilChr07G001233| 统一新 Gene ID | SmilChr07G001233 |
|---|---|
| 名称 | SmilChr07G001233 |
| 描述 | MAR-binding filament-like protein 1-1 |
| 染色体 / SeqID | Chr07 / NC_080393.1 |
| 坐标与链方向 | 9447527 - 9452451 / + |
| NCBI Gene ID | LOC130992410 |
|---|---|
| GeneID | 130992410 |
| locus_tag | - |
| NCBI Name | LOC130992410 |
| 原始查询 | LOC130992410 |
| 来源 | GFF basic annotation; NCBI GO GAF; Arabidopsis/Rice homolog |
|---|---|
| 描述 | MAR-binding filament-like protein 1-1 |
| 产物 | MAR-binding filament-like protein 1-1 |
| Arabidopsis | AT3G16000 (MFP1)MAR binding filament-like protein 1 [Source:NCBI gene (formerly Entrezgene);Acc:820845] identity=41.6; qcov=0.889; evalue=1.98e-134; confidence=medium |
| Rice | Os01g0180300- identity=34.7; qcov=0.881; evalue=8.58e-98; confidence=low |
| GO | GO:0000785 (chromatin); GO:0000793 (condensed chromosome); GO:0000796 (condensin complex); GO:0003682 (chromatin binding); GO:0007076 (mitotic chromosome condensation) |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130992410 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Chloroplast | 叶绿体 | 1.00000 | XP_057773019.1 |
| 2 | Chloroplast membrane | 叶绿体膜 | 1.00000 | XP_057773019.1 |
| 3 | Nucleus | 细胞核 | 0.00000 | XP_057773019.1 |
| 4 | Chromosome | 染色体 | 0.00000 | XP_057773019.1 |
| 5 | Centromere | 着丝粒 | 0.00000 | XP_057773019.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr7:9447778 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B123,B131 |
Chr7:9447819 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B67 |
Chr7:9447871 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | A4,B87 |
Chr7:9449062 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | A4,B87 |
Chr7:9449153 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B73 |
Chr7:9450493 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B118 |
Chr7:9450772 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | A4 |
Chr7:9450780 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | D10 |
Chr7:9450928 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B65 |
Chr7:9451053 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | A4,B87 |
Chr7:9451122 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B93 |
Chr7:9451314 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B78,B8,B82 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。