Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr07G001274`

染色体: Chr07 坐标: 9799172-9802300 链方向: + 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr07G001274`
名称	SmilChr07G001274
描述	sulfite exporter TauE/SafE family protein 3-like
染色体 / SeqID	Chr07 / NC_080393.1
坐标与链方向	9799172 - 9802300 / `+`

ID 对照

NCBI Gene ID	`LOC130992445`
GeneID	`130992445`
locus_tag	`-`
NCBI Name	`LOC130992445`
原始查询	`LOC130992445`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	sulfite exporter TauE/SafE family protein 3-like
产物	sulfite exporter TauE/SafE family protein 3-like
Arabidopsis	`AT2G25737` (AT2G25737) Sulfite exporter TauE/SafE family protein [Source:NCBI gene (formerly Entrezgene);Acc:817116] identity=57.6; qcov=0.691; evalue=6.47e-95; confidence=high
Rice	`Os09g0344800` - identity=56.5; qcov=0.7; evalue=3.03e-88; confidence=high
GO	GO:0016020 (membrane); GO:0016567 (protein ubiquitination); GO:0031464 (Cul4A-RING E3 ubiquitin ligase complex)
KEGG	-
Pfam	PF01925 (TauE)
InterPro	-
eggNOG	-
NR	GeneID:130992445

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Cell membrane	细胞膜	0.80000	`XP_057773056.1`
2	Vacuole	液泡	0.80000	`XP_057773060.1`
3	Vacuole membrane	液泡膜	0.80000	`XP_057773060.1`
4	Nucleus	细胞核	0.00000	`XP_057773056.1`
5	Chromosome	染色体	0.00000	`XP_057773056.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr7:9800485`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B4
`Chr7:9800493`	`C`	`T`	EMS_canonical_SNV	CDS_variant	5	B25,B94,C34,C57,D8
`Chr7:9801232`	`C`	`T`	EMS_canonical_SNV	CDS_variant	4	B25,B94,C34,C57
`Chr7:9801457`	`G`	`A`	EMS_canonical_SNV	CDS_variant	3	B3,C15,C42
`Chr7:9802067`	`G`	`A`	EMS_canonical_SNV	CDS_variant	5	B25,B94,C34,C57,D8

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057773056.1

484 aa

242

484

TauE

PF01925 TauE 85-203 aa PF01925 TauE 343-449 aa

XP_057773057.1

484 aa

242

484

TauE

PF01925 TauE 85-203 aa PF01925 TauE 343-449 aa

XP_057773058.1

484 aa

242

484

TauE

PF01925 TauE 85-203 aa PF01925 TauE 343-449 aa

XP_057773060.1

417 aa

208

417

TauE

PF01925 TauE 276-382 aa

XP_057773061.1

417 aa

208

417

TauE

PF01925 TauE 276-382 aa

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057773056.1`	Pfam	`PF01925`	TauE	Family	85	203	7.3e-22	78.9	Sulfite exporter TauE/SafE
`XP_057773056.1`	Pfam	`PF01925`	TauE	Family	343	449	7.3e-22	78.9	Sulfite exporter TauE/SafE
`XP_057773057.1`	Pfam	`PF01925`	TauE	Family	85	203	7.3e-22	78.9	Sulfite exporter TauE/SafE
`XP_057773057.1`	Pfam	`PF01925`	TauE	Family	343	449	7.3e-22	78.9	Sulfite exporter TauE/SafE
`XP_057773058.1`	Pfam	`PF01925`	TauE	Family	85	203	7.3e-22	78.9	Sulfite exporter TauE/SafE
`XP_057773058.1`	Pfam	`PF01925`	TauE	Family	343	449	7.3e-22	78.9	Sulfite exporter TauE/SafE
`XP_057773060.1`	Pfam	`PF01925`	TauE	Family	276	382	4.3e-16	60.0	Sulfite exporter TauE/SafE
`XP_057773061.1`	Pfam	`PF01925`	TauE	Family	276	382	4.3e-16	60.0	Sulfite exporter TauE/SafE

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

5 records

下载 cDNA FASTA

XM_057917078.1
ATATTTTGATTTTATTTATACTCGACATTTATATATTTTTAATCATGAGAATGAGTAGAGTAGTTTCAACTTTCATCACTAAGATTTACAAAGATTCTCTGTTGAAAGCAACAGCTGCGTTTTTTTATGGTGGAAGAAACTGGACACCAGAGCCGCAGACAAACTATATTTAAAGGTGAAAAATAGGGTTTTTGTTTGGAGGAATTCATGGCTGAGATAGGAGCAGAATGTAAGAAAGGTTTGAGAGGGAAAGCTGTGAT...

XM_057917075.1
GATTTTATTTATACTCGACATTTATATATTTTTAATCATGAGAATGAGTAGAGTAGTTTCAACTTTCATCACTAAGATTTACAAAGATTCTCTGTTGAAAGCAACAGCTGCGTTTTTTTATGGTGGAAGAAACTGGACACCAGAGCCGCAGACAAACTATATTTAAAGGTGAAAAATAGGGTTTTTGTTTGGAGGAATTCATGGCTGAGATAGGAGCAGAATGTAAGAAAGGTTTGAGAGGGAAAGCTGTGATTTTGATT...

CDS

5 records

下载 CDS FASTA

LOC130992445
ATGGCTGAGATAGGAGCAGAATGTAAGAAAGGTTTGAGAGGGAAAGCTGTGATTTTGATTGCTTTACTTGTTTTAGCTTGTGGGATTGTTTCAGCTCAAGAGGATCTTGAGCAAGTGACTACTAAAGGAAATGGTCCCTCTGAATCTGGTTATTCCACAAGAATAATCAGCTTCTTGAAGCAAAGTGGAGACTTGCTTTCAAAACCTGTTTGGCCTGATATCGAATTTGGATGGAGAATAGTTCTTGGCACTGTGGTTGG...

Protein

5 records

下载 Protein FASTA

XP_057773056.1
MAEIGAECKKGLRGKAVILIALLVLACGIVSAQEDLEQVTTKGNGPSESGYSTRIISFLKQSGDLLSKPVWPDIEFGWRIVLGTVVGFFGAALASVGGVGGGGIFVPMLSLIIGFDPKTSTAISKCMITGAALATVYYNIKLRHPSLDLPIIDYDLALLFQPMLILGISIGVFFNVILAEWMVTVLLIVLFIATSTKAFFKGVETWKKETIIKKEAARRFASDSRANGSEEAPYKLLPTGPTDENRVNLNEQKPLEVSVI...

XP_057773057.1
MAEIGAECKKGLRGKAVILIALLVLACGIVSAQEDLEQVTTKGNGPSESGYSTRIISFLKQSGDLLSKPVWPDIEFGWRIVLGTVVGFFGAALASVGGVGGGGIFVPMLSLIIGFDPKTSTAISKCMITGAALATVYYNIKLRHPSLDLPIIDYDLALLFQPMLILGISIGVFFNVILAEWMVTVLLIVLFIATSTKAFFKGVETWKKETIIKKEAARRFASDSRANGSEEAPYKLLPTGPTDENRVNLNEQKPLEVSVI...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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