Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr07G001555`

染色体: Chr07 坐标: 12673766-12679083 链方向: + 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr07G001555`
名称	SmilChr07G001555
描述	CBL-interacting serine/threonine-protein kinase 8-like
染色体 / SeqID	Chr07 / NC_080393.1
坐标与链方向	12673766 - 12679083 / `+`

ID 对照

NCBI Gene ID	`LOC130992610`
GeneID	`130992610`
locus_tag	`-`
NCBI Name	`LOC130992610`
原始查询	`LOC130992610`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	CBL-interacting serine/threonine-protein kinase 8-like
产物	CBL-interacting serine/threonine-protein kinase 8-like
Arabidopsis	`AT4G24400` (CIPK8) CBL-interacting protein kinase 8 [Source:NCBI gene (formerly Entrezgene);Acc:828542] identity=79.6; qcov=1; evalue=0; confidence=high
Rice	`Os01g0536000` (OsCIPK08) - identity=76.1; qcov=0.993; evalue=0; confidence=high
GO	GO:0004672 (protein kinase activity); GO:0005524 (ATP binding); GO:0006468 (protein phosphorylation); GO:0007165 (signal transduction)
KEGG	-
Pfam	PF00069 (Pkinase); PF03822 (NAF); PF07714 (PK_Tyr_Ser-Thr)
InterPro	-
eggNOG	-
NR	GeneID:130992610

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Cytosol	细胞质基质	1.00000	`XP_057773298.1`
2	Cytoplasm	细胞质	0.80000	`XP_057773298.1`
3	Nucleus	细胞核	0.60000	`XP_057773299.1`
4	Cell membrane	细胞膜	0.20000	`XP_057773299.1`
5	Chromosome	染色体	0.00000	`XP_057773298.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr7:12675533`	`TG`	`T`	1bp_deletion	frameshift_variant	1	C60
`Chr7:12675533`	`TG`	`T`	1bp_deletion	CDS_variant	1	C60
`Chr7:12675735`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	A25
`Chr7:12676133`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B84
`Chr7:12678522`	`A`	`AT`	1bp_insertion	frameshift_variant	4	B139,B15,C42,C76
`Chr7:12678522`	`A`	`AT`	1bp_insertion	CDS_variant	4	B139,B15,C42,C76
`Chr7:12678542`	`AT`	`A`	1bp_deletion	frameshift_variant	4	B139,B15,C42,C76
`Chr7:12678542`	`AT`	`A`	1bp_deletion	CDS_variant	4	B139,B15,C42,C76

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057773298.1

453 aa

226

453

Pkinase

PK_Tyr_Ser-Thr

NAF

PF00069 Pkinase 9-262 aa PF07714 PK_Tyr_Ser-Thr 11-258 aa PF03822 NAF 306-364 aa

XP_057773299.1

447 aa

224

447

Pkinase

PK_Tyr_Ser-Thr

NAF

PF00069 Pkinase 9-262 aa PF07714 PK_Tyr_Ser-Thr 11-258 aa PF03822 NAF 306-364 aa

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057773298.1`	Pfam	`PF00069`	Pkinase	Domain	9	262	1.1e-72	245.4	Protein kinase domain
`XP_057773298.1`	Pfam	`PF07714`	PK_Tyr_Ser-Thr	Domain	11	258	1.2e-37	130.3	Protein tyrosine and serine/threonine kinase
`XP_057773298.1`	Pfam	`PF03822`	NAF	Domain	306	364	3.3e-19	69.5	NAF domain
`XP_057773299.1`	Pfam	`PF00069`	Pkinase	Domain	9	262	1e-72	245.4	Protein kinase domain
`XP_057773299.1`	Pfam	`PF07714`	PK_Tyr_Ser-Thr	Domain	11	258	1.1e-37	130.4	Protein tyrosine and serine/threonine kinase
`XP_057773299.1`	Pfam	`PF03822`	NAF	Domain	306	364	3.2e-19	69.5	NAF domain

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

2 records

下载 cDNA FASTA

XM_057917315.1
AATAAGCATAAAGGCCAACTTCGTTAGCACGCAAACACAAAATCCCAATTTAGAAATAAAATGAATACATTCTTCGTTAATCACACGCCTAAAGACAGCTGTTGGCAATCAGTCTTCGCTCTCTGAATTTCTTTCCGCGAATCGGAGCGCCGCCTCCTCGCCGCCGTGTCCCAACTCGAACATCTGAAAACCAGCTGCAGCCAATAATTTTAGAGCGAATAAAAGGTGTTAATAAAATACTAGAATAAAAATCATTTTCC...

XM_057917316.1
AATAAGCATAAAGGCCAACTTCGTTAGCACGCAAACACAAAATCCCAATTTAGAAATAAAATGAATACATTCTTCGTTAATCACACGCCTAAAGACAGCTGTTGGCAATCAGTCTTCGCTCTCTGAATTTCTTTCCGCGAATCGGAGCGCCGCCTCCTCGCCGCCGTGTCCCAACTCGAACATCTGAAAACCAGCTGCAGCCAATAATTTTAGAGCGAATAAAAGGTGTTAATAAAATACTAGAATAAAAATCATTTTCC...

CDS

2 records

下载 CDS FASTA

LOC130992610
ATGGTGGTGCGGAAGGTCGGCAAGTACGAGGTGGGGCGGACGATTGGCGAAGGGACATTTGCGAAGGTGAAGTTCGCGCAAAACACGGAGACTGGGGAAAGCGTCGCCATGAAAGTCCTCGATCGCTCCACCATAATCAAGCACAAGATGATTGATCAGATAAAGCGGGAGATATCTATTATGAAGCGTGTTAGACATCCGTATGTTGTTCGCTTACATGAGGTTATTGCAAGCCGTACAAAGATATATATCATATTGGA...

Protein

2 records

下载 Protein FASTA

XP_057773298.1
MVVRKVGKYEVGRTIGEGTFAKVKFAQNTETGESVAMKVLDRSTIIKHKMIDQIKREISIMKRVRHPYVVRLHEVIASRTKIYIILEFITGGELFDKIVHHGRLSESEARRYFQQLIDGVDFCHSKGVYHRDLKPENLLLDSQGNLRISDFGLSALPAEGVTLLRTTCGTPNYVAPEVLSHKGYHGALADIWSCGVILYVLMAGYLPFDELDLTTLYGKIDNAEFSCPSWFPVGAKSLIHRILDPNPETRIRIDEIRNDE...

XP_057773299.1
MVVRKVGKYEVGRTIGEGTFAKVKFAQNTETGESVAMKVLDRSTIIKHKMIDQIKREISIMKRVRHPYVVRLHEVIASRTKIYIILEFITGGELFDKIVHHGRLSESEARRYFQQLIDGVDFCHSKGVYHRDLKPENLLLDSQGNLRISDFGLSALPAEGVTLLRTTCGTPNYVAPEVLSHKGYHGALADIWSCGVILYVLMAGYLPFDELDLTTLYGKIDNAEFSCPSWFPVGAKSLIHRILDPNPETRIRIDEIRNDE...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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