Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr07G001552`

染色体: Chr07 坐标: 12641435-12648052 链方向: - 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr07G001552`
名称	SmilChr07G001552
描述	uncharacterized SmilChr07G001552
染色体 / SeqID	Chr07 / NC_080393.1
坐标与链方向	12641435 - 12648052 / `-`

ID 对照

NCBI Gene ID	`LOC130992635`
GeneID	`130992635`
locus_tag	`-`
NCBI Name	`LOC130992635`
原始查询	`LOC130992635`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	Endoplasmic reticulum vesicle transporter protein [Source:NCBI gene (formerly Entrezgene);Acc:821798]; symbol=AT3G22290; hit=AT3G22290; species=arabidopsis; confidence=high
产物	Endoplasmic reticulum vesicle transporter protein [Source:NCBI gene (formerly Entrezgene);Acc:821798]; symbol=AT3G22290; hit=AT3G22290; species=arabidopsis; confidence=high
Arabidopsis	`AT3G22290` (AT3G22290) Endoplasmic reticulum vesicle transporter protein [Source:NCBI gene (formerly Entrezgene);Acc:821798] identity=78.5; qcov=1; evalue=0; confidence=high
Rice	`Os03g0784400` (OSJNBb0093E13.1) - identity=76.4; qcov=0.986; evalue=0; confidence=high
GO	GO:0005783 (endoplasmic reticulum); GO:0030134 (COPII-coated ER to Golgi transport vesicle)
KEGG	-
Pfam	PF07970 (COPIIcoated_ERV); PF13850 (ERGIC_N)
InterPro	-
eggNOG	-
NR	GeneID:130992635

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Golgi apparatus	高尔基体	1.00000	`XP_057773337.1`
2	Cis-golgi network	Cis-golgi network	1.00000	`XP_057773337.1`
3	Endoplasmic reticulum membrane	内质网膜	0.80000	`XP_057773338.1`
4	Endoplasmic reticulum	内质网	0.60000	`XP_057773337.1`
5	Cytoplasmic vesicle	细胞质囊泡	0.60000	`XP_057773338.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr7:12641766`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B95
`Chr7:12642570`	`C`	`T`	EMS_canonical_SNV	CDS_variant	3	A5,C3,C64
`Chr7:12642720`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	C39,C50
`Chr7:12642764`	`G`	`A`	EMS_canonical_SNV	CDS_variant	4	B117,B26,B95,D4
`Chr7:12642975`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	C70
`Chr7:12645471`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B53
`Chr7:12646194`	`G`	`A`	EMS_canonical_SNV	CDS_variant	3	B133,B57,B7
`Chr7:12647632`	`GC`	`G`	1bp_deletion	frameshift_variant	14	B103,B109,B117,B37,B48,B71,B72,B78,C14,C15,C3,C37,C59,D8
`Chr7:12647655`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	C39
`Chr7:12647688`	`G`	`A`	EMS_canonical_SNV	CDS_variant	2	B122,B34

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057773337.1

359 aa

180

359

ERGIC_N

COPIIcoated_ERV

PF13850 ERGIC_N 8-97 aa PF07970 COPIIcoated_ERV 158-328 aa

XP_057773338.1

352 aa

176

352

ERGIC_N

COPIIcoated_ERV

PF13850 ERGIC_N 8-97 aa PF07970 COPIIcoated_ERV 158-332 aa

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057773337.1`	Pfam	`PF13850`	ERGIC_N	Domain	8	97	1.5e-28	99.5	Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC)
`XP_057773337.1`	Pfam	`PF07970`	COPIIcoated_ERV	Family	158	328	6.1e-45	154.5	Endoplasmic reticulum vesicle transporter
`XP_057773338.1`	Pfam	`PF13850`	ERGIC_N	Domain	8	97	1.6e-28	99.4	Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC)
`XP_057773338.1`	Pfam	`PF07970`	COPIIcoated_ERV	Family	158	332	2.9e-46	158.8	Endoplasmic reticulum vesicle transporter

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

2 records

下载 cDNA FASTA

XM_057917355.1
ATTTGGACTAAGGTTTTTCGTCGGTCCTCCTATCTTGACCCGTAACATATATTTGTCAATCTCCGTTTCATATTTTTTCGCTCATTGCAGGCGCAAATTTCTCAGTTTCCTCGAATTTCTCAAGATAGGGGATTCAATCATTGCTTGATTCTGGAGGGATATTAGGGTTGATAAGATATTGAGGAAAGACAAAAAAAGATGGGTAATTTCAAGCAGGCGCTAAGAAACATCGATGCGTTCCCGAGAGCTGAAGACCATCT...

XM_057917354.1
ATTTGGACTAAGGTTTTTCGTCGGTCCTCCTATCTTGACCCGTAACATATATTTGTCAATCTCCGTTTCATATTTTTTCGCTCATTGCAGGCGCAAATTTCTCAGTTTCCTCGAATTTCTCAAGATAGGGGATTCAATCATTGCTTGATTCTGGAGGGATATTAGGGTTGATAAGATATTGAGGAAAGACAAAAAAAGATGGGTAATTTCAAGCAGGCGCTAAGAAACATCGATGCGTTCCCGAGAGCTGAAGACCATCT...

CDS

2 records

下载 CDS FASTA

LOC130992635
ATGGGTAATTTCAAGCAGGCGCTAAGAAACATCGATGCGTTCCCGAGAGCTGAAGACCATCTGCTGCAAAAGACAAAATCCGGGGCCTTTGTCTCTATTGTTGGGCTGGTAATCATGGCAACTTTGTTCGTGCATGAATTGACTTATTATCTCTCAACATATACCGTACACCAGATGTCAGTAGACTTAAAACGTGGAGAAACACTTCCGATCCATATAAATATGACATTCCCATCTTTGCCATGCGATGTGCTTAGTGT...

Protein

2 records

下载 Protein FASTA

XP_057773337.1
MGNFKQALRNIDAFPRAEDHLLQKTKSGAFVSIVGLVIMATLFVHELTYYLSTYTVHQMSVDLKRGETLPIHINMTFPSLPCDVLSVDAIDMSGKHEVDLDTNIWKLRLNHDGVIIGTEYLNDLVEKGHVAHGHDDHKDHHEESDHKVKLHNLDEEAEDMIKKVKHALANAEGCRVYGVLDVQRVAGNFHISVHGLNIFVAQMIFEGSSHVNVSHIIHDLSFGPKYPGIENPLDGTSRILRGASGTFKYYIKIVPTEYKY...

XP_057773338.1
MGNFKQALRNIDAFPRAEDHLLQKTKSGAFVSIVGLVIMATLFVHELTYYLSTYTVHQMSVDLKRGETLPIHINMTFPSLPCDVLSVDAIDMSGKHEVDLDTNIWKLRLNHDGVIIGTEYLNDLVEKGHVAHGHDDHKDHHEESDHKVKLHNLDEEAEDMIKKVKHALANAEGCRVYGVLDVQRVAGNFHISVHGLNIFVAQMIFEGSSHVNVSHIIHDLSFGPKYPGIENPLDGTSRILRGASGTFKYYIKIVPTEYKY...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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