当前解析结果
SmilChr07G003813| 统一新 Gene ID | SmilChr07G003813 |
|---|---|
| 名称 | SmilChr07G003813 |
| 描述 | uncharacterized SmilChr07G003813 |
| 染色体 / SeqID | Chr07 / NC_080393.1 |
| 坐标与链方向 | 46979251 - 46989898 / + |
| NCBI Gene ID | LOC130992811 |
|---|---|
| GeneID | 130992811 |
| locus_tag | - |
| NCBI Name | LOC130992811 |
| 原始查询 | LOC130992811 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:815895]; symbol=AT2G14095; hit=AT2G14095; species=arabidopsis; confidence=low |
| 产物 | uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:815895]; symbol=AT2G14095; hit=AT2G14095; species=arabidopsis; confidence=low |
| Arabidopsis | AT2G14095 (AT2G14095)uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:815895] identity=36.2; qcov=0.41; evalue=1.55e-08; confidence=low |
| Rice | -- |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130992811 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Chloroplast | 叶绿体 | 1.00000 | XP_057773543.1 |
| 2 | Chloroplast thylakoid | 类囊体 | 1.00000 | XP_057773543.1 |
| 3 | Chloroplast thylakoid membrane | 类囊体膜 | 0.80000 | XP_057773544.1 |
| 4 | Chloroplast stroma | 叶绿体基质 | 0.20000 | XP_057773543.1 |
| 5 | Nucleus | 细胞核 | 0.00000 | XP_057773543.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr7:46979418 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B30 |
Chr7:46979594 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B26 |
Chr7:46979602 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B35 |
Chr7:46979621 |
T |
TGA |
2bp_insertion | frameshift_variant | 3 | B10,B45,C19 |
Chr7:46979621 |
T |
TGA |
2bp_insertion | CDS_variant | 3 | B10,B45,C19 |
Chr7:46980302 |
CT |
C |
1bp_deletion | frameshift_variant | 5 | B12,B122,B136,B44,B55 |
Chr7:46980302 |
CT |
C |
1bp_deletion | CDS_variant | 5 | B12,B122,B136,B44,B55 |
Chr7:46980309 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B35 |
Chr7:46981195 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | A10,B135,C35,C40 |
Chr7:46981205 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C70 |
Chr7:46981283 |
TG |
T |
1bp_deletion | frameshift_variant | 1 | D10 |
Chr7:46981283 |
TG |
T |
1bp_deletion | CDS_variant | 1 | D10 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
4 records
下载 cDNA FASTA4 records
下载 CDS FASTA4 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。