Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及有 accession 序列支持的文献基因名查询；未闭环名称仅提供候选导航。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr07G003585`

染色体: Chr07 坐标: 41871801-41886681 链方向: + 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr07G003585`
名称	SmilChr07G003585
描述	auxilin-related protein 2-like
染色体 / SeqID	Chr07 / NC_080393.1
坐标与链方向	41871801 - 41886681 / `+`

ID 对照

NCBI Gene ID	`LOC130992988`
GeneID	`130992988`
locus_tag	`-`
NCBI Name	`LOC130992988`
原始查询	`LOC130992988`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; NCBI GO GAF; Arabidopsis/Rice homolog
描述	auxilin-related protein 2-like
产物	auxilin-related protein 2-like
Arabidopsis	`AT4G12770` (AT4G12770) Chaperone DnaJ-domain superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:826889] identity=45.61; qcov=1.0; evalue=5.88e-163; confidence=high
Rice	`Os11g0661200` (OsDjC78) - identity=68.24; qcov=0.247; evalue=6.45e-87; confidence=weak
GO	GO:0005737 (cytoplasm); GO:0030276 (clathrin binding); GO:0031982 (vesicle); GO:0043231 (intracellular membrane-bounded organelle); GO:0072318 (clathrin coat disassembly); GO:0072583 (clathrin-dependent endocytosis)
KEGG	-
Pfam	-
InterPro	-
eggNOG	-
NR	GeneID:130992988

打开注释模块

非零投票定位候选（最多五项）

Rank	定位位置	中文	五折投票比例	Protein ID
1	Golgi apparatus	高尔基体	1.00000	`XP_057773684.1`
2	Trans-golgi network	Trans-golgi network	1.00000	`XP_057773684.1`
3	Vesicle	囊泡	0.40000	`XP_057773686.1`
4	Cytoplasmic vesicle	细胞质囊泡	0.20000	`XP_057773684.1`
5	Clathrin-coated vesicle	Clathrin-coated vesicle	0.20000	`XP_057773688.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr7:41872388`	`C`	`T`	EMS_canonical_SNV	CDS_variant	4	A19,B125,B21,B89
`Chr7:41872419`	`C`	`T`	EMS_canonical_SNV	CDS_variant	3	A20,C54,D7
`Chr7:41872505`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	C65
`Chr7:41872738`	`G`	`A`	EMS_canonical_SNV	CDS_variant	2	C39,C58
`Chr7:41872790`	`C`	`T`	EMS_canonical_SNV	CDS_variant	3	B60,B92,C2
`Chr7:41873860`	`C`	`T`	EMS_canonical_SNV	CDS_variant	4	A2,A21,B13,B20
`Chr7:41873913`	`C`	`T`	EMS_canonical_SNV	CDS_variant	4	C14,C39,C58,D8
`Chr7:41874062`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B13
`Chr7:41874384`	`C`	`T`	EMS_canonical_SNV	stop_gained	12	B110,B111,B113,B131,B23,B27,B95,C29,C30,C54,C56,C57
`Chr7:41874522`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B26
`Chr7:41874712`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	D10
`Chr7:41874713`	`G`	`A`	EMS_canonical_SNV	CDS_variant	4	A21,B101,B26,B30

进入 EMS 突变库

预测功能结构域

当前发布数据中，此基因没有可展示的 Pfam 结构域命中。

进入结构域查询

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

25 records

下载 cDNA FASTA

XR_009091553.1
AGTGATAAAATTGAAGAGGACAAAACAAAAAGAAAAAAGAAAAAGAAAAGAGAAGAAGCGAAAAGAAGAAATAAGCAAAATTTGAACGTAGAGATATCTGATGCAGATGCAATAGTACAAACTACTCTGAGCAAAGACGCAAAATCTCAAGTGGAAAGCCAATCAATTTTCCGCTACGAAGCTGAAACAAGTTTGATTATCGCCATATGCAGAGGGAGTGGCAGTTGATTTTACAGAGGGGGAGACAACTAAAATTCGAA...

XR_009091554.1
AGTGATAAAATTGAAGAGGACAAAACAAAAAGAAAAAAGAAAAAGAAAAGAGAAGAAGCGAAAAGAAGAAATAAGCAAAATTTGAACGTAGAGATATCTGATGCAGATGCAATAGTACAAACTACTCTGAGCAAAGACGCAAAATCTCAAGTGGAAAGCCAATCAATTTTCCGCTACGAAGCTGAAACAAGTTTGATTATCGCCATATGCAGAGGGAGTGGCAGTTGATTTTACAGAGGGGGAGACAACTAAAATTCGAA...

CDS

6 records

下载 CDS FASTA

lcl|NC_080393.1_cds_XP_057773690.1_38828
ATGGACGATCTGGATATCCTAGCCCGCGACTTCGGGTTCGGGCCCGGAGGGAAATCCAAACCGATGAGATCCGCGCAGTTCAGCGAGGTGTTTGGCGAGCCCGCCAAGTTCTCACCCAGCACAAATTATAGTACTAACACTCAACACTCTTCAATGGGGGACCTTGATTATGATTCCATGTTCAATCGGGAGGCGAATAGTGTTAACAATACTAGCAGCCGCAAAACGTCGTCGGCGTCGGCTCCTGTTTATGATGAGCC...

lcl|NC_080393.1_cds_XP_057773688.1_38829
ATGGACGATCTGGATATCCTAGCCCGCGACTTCGGGTTCGGGCCCGGAGGGAAATCCAAACCGATGAGATCCGCGCAGTTCAGCGAGGTGTTTGGCGAGCCCGCCAAGTTCTCACCCAGCACAAATTATAGTACTAACACTCAACACTCTTCAATGGGGGACCTTGATTATGATTCCATGTTCAATCGGGAGGCGAATAGTGTTAACAATACTAGCAGCCGCAAAACGTCGTCGGCGTCGGCTCCTGTTTATGATGAGCC...

Protein

6 records

下载 Protein FASTA

XP_057773684.1
MDDLDILARDFGFGPGGKSKPMRSAQFSEVFGEPAKFSPSTNYSTNTQHSSMGDLDYDSMFNREANSVNNTSSRKTSSASAPVYDEPVYDDDIFKGLPGLKNNSPTSAVRSDSDVFTGISSHTSSKGGNQNHDFDDLLGNLGRSEQAKENIMSSSDRSKSNSTSKGFDDLLAGFGNGASAASNRPITESNSSSVPVGGSKHGSVLDETFLVSESVSTQGSSSSRVFPDPLEESSKHGKSRSTRAEASSGGGRGFDDSDTL...

XP_057773685.1
MDDLDILARDFGFGPGGKSKPMRSAQFSEVFGEPAKFSPSTNYSTNTQHSSMGDLDYDSMFNREANSVNNTSSRKTSSASAPVYDEPVYDDDIFKGLPGLKNNSPTSAVRSDSDVFTGISSHTSSKGGNQNHDFDDLLGNLGRSEQAKENIMSSSDRSKSNSTSKGFDDLLAGFGNGASAASNRPITESNSSSVPVGGSKHGSVLDETFLVSESVSTQGSSSSRVFPDPLEESSKHGKSRSTRAEASSGGGRGFDDSDTL...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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