当前解析结果
SmilChr07G000394| 统一新 Gene ID | SmilChr07G000394 |
|---|---|
| 名称 | SmilChr07G000394 |
| 描述 | uncharacterized SmilChr07G000394 |
| 染色体 / SeqID | Chr07 / NC_080393.1 |
| 坐标与链方向 | 2717383 - 2718804 / + |
| NCBI Gene ID | LOC130993040 |
|---|---|
| GeneID | 130993040 |
| locus_tag | - |
| NCBI Name | LOC130993040 |
| 原始查询 | LOC130993040 |
| 来源 | GFF basic annotation; NCBI GO GAF; Arabidopsis/Rice homolog |
|---|---|
| 描述 | FBD, F-box and Leucine Rich Repeat domains containing protein [Source:NCBI gene (formerly Entrezgene);Acc:824845]; symbol=AT3G56780; hit=AT3G56780; species=arabidopsis; confidence=low |
| 产物 | FBD, F-box and Leucine Rich Repeat domains containing protein [Source:NCBI gene (formerly Entrezgene);Acc:824845]; symbol=AT3G56780; hit=AT3G56780; species=arabidopsis; confidence=low |
| Arabidopsis | AT3G56780 (AT3G56780)FBD, F-box and Leucine Rich Repeat domains containing protein [Source:NCBI gene (formerly Entrezgene);Acc:824845] identity=25.8; qcov=0.45; evalue=1.26e-07; confidence=low |
| Rice | -- |
| GO | GO:0005515 (protein binding) |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130993040 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus | 细胞核 | 1.00000 | XP_057773744.1 |
| 2 | Chromosome | 染色体 | 0.00000 | XP_057773744.1 |
| 3 | Centromere | 着丝粒 | 0.00000 | XP_057773744.1 |
| 4 | Chromatin | 染色质 | 0.00000 | XP_057773744.1 |
| 5 | Telomere | 端粒 | 0.00000 | XP_057773744.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr7:2717413 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | B100,B12,B48,B82 |
Chr7:2717415 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B131 |
Chr7:2717519 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B62,C61 |
Chr7:2717562 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | A21,B101,C35 |
Chr7:2717613 |
A |
AT |
1bp_insertion | frameshift_variant | 28 | A19,A20,A4,B12,B121,B126,B130,B16,B27,B36,B40,B45,B46,B55,B66,B7,B78,B99,C11,C21,C29,C3,C48,C69,C74,C8,C80,C83 |
Chr7:2717615 |
CT |
C |
1bp_deletion | frameshift_variant | 28 | A19,A20,A4,B12,B121,B126,B130,B16,B27,B36,B40,B45,B46,B55,B66,B7,B78,B99,C11,C21,C29,C3,C48,C69,C74,C8,C80,C83 |
Chr7:2717628 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | C43,C78,D10 |
Chr7:2717685 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | A15 |
Chr7:2717705 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B80 |
Chr7:2717711 |
C |
T |
EMS_canonical_SNV | CDS_variant | 5 | A15,B126,B17,B2,C58 |
Chr7:2717721 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B12,B2 |
Chr7:2717733 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C5 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。