当前解析结果
SmilChr07G000424| 统一新 Gene ID | SmilChr07G000424 |
|---|---|
| 名称 | SmilChr07G000424 |
| 描述 | putative F-box/FBD/LRR-repeat protein At5g56810 |
| 染色体 / SeqID | Chr07 / NC_080393.1 |
| 坐标与链方向 | 2954125 - 2955483 / - |
| NCBI Gene ID | LOC130993043 |
|---|---|
| GeneID | 130993043 |
| locus_tag | - |
| NCBI Name | LOC130993043 |
| 原始查询 | LOC130993043 |
| 来源 | GFF basic annotation; NCBI GO GAF; Arabidopsis/Rice homolog |
|---|---|
| 描述 | putative F-box/FBD/LRR-repeat protein At5g56810 |
| 产物 | putative F-box/FBD/LRR-repeat protein At5g56810 |
| Arabidopsis | AT5G53840 (AT5G53840)F-box/RNI-like/FBD-like domains-containing protein [Source:NCBI gene (formerly Entrezgene);Acc:835465] identity=28.9; qcov=0.414; evalue=1.02e-09; confidence=low |
| Rice | Os04g0440300 (OsFbox211)- identity=31.2; qcov=0.177; evalue=9.14e-07; confidence=weak |
| GO | GO:0005515 (protein binding) |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130993043 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus | 细胞核 | 1.00000 | XP_057773745.1 |
| 2 | Chromosome | 染色体 | 0.00000 | XP_057773745.1 |
| 3 | Centromere | 着丝粒 | 0.00000 | XP_057773745.1 |
| 4 | Chromatin | 染色质 | 0.00000 | XP_057773745.1 |
| 5 | Telomere | 端粒 | 0.00000 | XP_057773745.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr7:2954145 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C25 |
Chr7:2954155 |
C |
T |
EMS_canonical_SNV | CDS_variant | 5 | A1,B40,B62,C25,C31 |
Chr7:2954201 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | A1 |
Chr7:2954561 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B87 |
Chr7:2954572 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B87 |
Chr7:2954685 |
CG |
C |
1bp_deletion | frameshift_variant | 3 | B135,B75,C5 |
Chr7:2954685 |
CG |
C |
1bp_deletion | CDS_variant | 3 | B135,B75,C5 |
Chr7:2954697 |
CA |
C |
1bp_deletion | frameshift_variant | 2 | B135,B75 |
Chr7:2954697 |
CA |
C |
1bp_deletion | CDS_variant | 2 | B135,B75 |
Chr7:2954703 |
C |
CA |
1bp_insertion | frameshift_variant | 3 | B135,B140,B75 |
Chr7:2954703 |
C |
CA |
1bp_insertion | CDS_variant | 3 | B135,B140,B75 |
Chr7:2954714 |
C |
T |
EMS_canonical_SNV | CDS_variant | 5 | A10,B79,C15,C58,C63 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。