当前解析结果
SmilChr01G003495| 统一新 Gene ID | SmilChr01G003495 |
|---|---|
| 名称 | SmilChr01G003495 |
| 描述 | uncharacterized SmilChr01G003495 |
| 染色体 / SeqID | Chr01 / NC_080387.1 |
| 坐标与链方向 | 53550772 - 53554084 / - |
| NCBI Gene ID | LOC130993167 |
|---|---|
| GeneID | 130993167 |
| locus_tag | - |
| NCBI Name | LOC130993167 |
| 原始查询 | LOC130993167 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | Low affinity potassium transport system protein [Source:NCBI gene (formerly Entrezgene);Acc:838885]; symbol=AT1G22790; hit=AT1G22790; species=arabidopsis; confidence=medium |
| 产物 | Low affinity potassium transport system protein [Source:NCBI gene (formerly Entrezgene);Acc:838885]; symbol=AT1G22790; hit=AT1G22790; species=arabidopsis; confidence=medium |
| Arabidopsis | AT1G22790 (AT1G22790)Low affinity potassium transport system protein [Source:NCBI gene (formerly Entrezgene);Acc:838885] identity=48.3; qcov=1.03; evalue=6.27e-50; confidence=medium |
| Rice | Os01g0589700- identity=47.7; qcov=0.99; evalue=1.84e-46; confidence=medium |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130993167 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Cell membrane | 细胞膜 | 1.00000 | XP_057773930.1 |
| 2 | Nucleus | 细胞核 | 0.20000 | XP_057773930.1 |
| 3 | Cytoplasm | 细胞质 | 0.20000 | XP_057773938.1 |
| 4 | Chromosome | 染色体 | 0.00000 | XP_057773930.1 |
| 5 | Centromere | 着丝粒 | 0.00000 | XP_057773930.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr1:53552399 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B126,B80,C6 |
Chr1:53552531 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B140,B37,C20 |
Chr1:53552636 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B139 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
2 records
下载 cDNA FASTA2 records
下载 CDS FASTA2 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。