Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr07G002174`

染色体: Chr07 坐标: 19932562-19938524 链方向: + 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr07G002174`
名称	SmilChr07G002174
描述	65-kDa microtubule-associated protein 6-like
染色体 / SeqID	Chr07 / NC_080393.1
坐标与链方向	19932562 - 19938524 / `+`

ID 对照

NCBI Gene ID	`LOC130993255`
GeneID	`130993255`
locus_tag	`-`
NCBI Name	`LOC130993255`
原始查询	`LOC130993255`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	65-kDa microtubule-associated protein 6-like
产物	65-kDa microtubule-associated protein 6-like
Arabidopsis	`AT2G01910` (ATMAP65-6) Microtubule associated protein (MAP65/ASE1) family protein [Source:NCBI gene (formerly Entrezgene);Acc:814722] identity=68.5; qcov=1.02; evalue=0; confidence=high
Rice	`Os03g0237600` - identity=58.5; qcov=1.01; evalue=0; confidence=high
GO	GO:0000226 (microtubule cytoskeleton organization); GO:0005737 (cytoplasm); GO:0005819 (spindle); GO:0008017 (microtubule binding)
KEGG	-
Pfam	PF03999 (MAP65_ASE1)
InterPro	-
eggNOG	-
NR	GeneID:130993255

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Cytoskeleton	细胞骨架	1.00000	`XP_057774060.1`
2	Spindle	Spindle	1.00000	`XP_057774060.1`
3	Chromosome	染色体	0.80000	`XP_057774062.1`
4	Spindle pole	Spindle pole	0.80000	`XP_057774060.1`
5	Nucleus	细胞核	0.60000	`XP_057774062.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr7:19933468`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B43
`Chr7:19935118`	`G`	`A`	EMS_canonical_SNV	CDS_variant	3	A18,B108,B35
`Chr7:19936075`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	C87
`Chr7:19936259`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	A25
`Chr7:19936306`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B22
`Chr7:19936739`	`G`	`A`	EMS_canonical_SNV	CDS_variant	3	B137,C35,C70
`Chr7:19936978`	`GT`	`G`	1bp_deletion	frameshift_variant	1	B11
`Chr7:19936978`	`GT`	`G`	1bp_deletion	CDS_variant	1	B11
`Chr7:19937017`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B41
`Chr7:19938025`	`TC`	`T`	1bp_deletion	frameshift_variant	1	B3
`Chr7:19938025`	`TC`	`T`	1bp_deletion	CDS_variant	1	B3

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057774060.1

598 aa

299

598

MAP65_ASE1

PF03999 MAP65_ASE1 21-513 aa

XP_057774061.1

596 aa

298

596

MAP65_ASE1

PF03999 MAP65_ASE1 21-511 aa

XP_057774062.1

556 aa

278

556

MAP65_ASE1

PF03999 MAP65_ASE1 1-471 aa

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057774060.1`	Pfam	`PF03999`	MAP65_ASE1	Family	21	513	6.3e-80	269.9	Microtubule associated protein (MAP65/ASE1 family)
`XP_057774061.1`	Pfam	`PF03999`	MAP65_ASE1	Family	21	511	1.6e-78	265.3	Microtubule associated protein (MAP65/ASE1 family)
`XP_057774062.1`	Pfam	`PF03999`	MAP65_ASE1	Family	1	471	9.2e-73	246.3	Microtubule associated protein (MAP65/ASE1 family)

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

3 records

下载 cDNA FASTA

XM_057918078.1
GATGCGTTGACGTAAAACAAGAGGAGAGTGGCGGTAGTGAGACATGAATTGGAAATAGTGATTCCGCATGACTATTAACAGAAGGCGACGAGAATAATTTTATTGAGAGGGGAATATATCGTATTGTAATAATAAATGATAAATATTCGACACCACTTCCGCTCTTCTCACTTAACACCGGAGGCGCACCGTAGCATAGAACTCCGCGCTGATCTAATTTGCACAGATCCACCTGCATTTGCGCAAGTTAGCCCCCACCA...

XM_057918077.1
GATGCGTTGACGTAAAACAAGAGGAGAGTGGCGGTAGTGAGACATGAATTGGAAATAGTGATTCCGCATGACTATTAACAGAAGGCGACGAGAATAATTTTATTGAGAGGGGAATATATCGTATTGTAATAATAAATGATAAATATTCGACACCACTTCCGCTCTTCTCACTTAACACCGGAGGCGCACCGTAGCATAGAACTCCGCGCTGATCTAATTTGCACAGATCCACCTGCATTTGCGCAAGTTAGCCCCCACCA...

CDS

3 records

下载 CDS FASTA

LOC130993255
ATGATGACTGCTGCATTTGGGAGTAATTCCATCAGTTTTCATACAAGCAATACTTGTAATACTCTGCTCAAAGAACTTCAGCAATTGTGGACTGAAATTGGGGAGACTCAAGCTGATAAAGACCGCATGTTAATGGAGCTGGAGAGAGAGTGTTTGGAGATCTACAGAAGAAAGGTTGATGAGGCCACAAATGCTAAGGCATGCCTTCATCAATCTATTGCTTCCATGGAAGCTGAGGTTGCAATGCTTATTGCAGCTCT...

Protein

3 records

下载 Protein FASTA

XP_057774060.1
MMTAAFGSNSISFHTSNTCNTLLKELQQLWTEIGETQADKDRMLMELERECLEIYRRKVDEATNAKACLHQSIASMEAEVAMLIAALGEININLPVQSDKKAKSLKGQLASVRPLVEDLKLKKEERMKQFADIKSQIEKITGEISGYGSSMSVLTLEEQDLSVRKLTEHQSKLRALKKEKSERLQKVMDYANEVHTLCGVLNIDFGQTVSDIHPSLHESSMGLVTNISDSTLEGLDQAVLKLKTEKKFRLQKLKDVTGSL...

XP_057774061.1
MMTAAFGSNSISFHTSNTCNTLLKELQQLWTEIGETQADKDRMLMELERECLEIYRRKVDEATNAKACLHQSIASMEAEVAMLIAALGEININLPSDKKAKSLKGQLASVRPLVEDLKLKKEERMKQFADIKSQIEKITGEISGYGSSMSVLTLEEQDLSVRKLTEHQSKLRALKKEKSERLQKVMDYANEVHTLCGVLNIDFGQTVSDIHPSLHESSMGLVTNISDSTLEGLDQAVLKLKTEKKFRLQKLKDVTGSLFE...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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