当前解析结果
SmilChr07G002213| 统一新 Gene ID | SmilChr07G002213 |
|---|---|
| 名称 | SmilChr07G002213 |
| 描述 | uncharacterized SmilChr07G002213 |
| 染色体 / SeqID | Chr07 / NC_080393.1 |
| 坐标与链方向 | 20386185 - 20389012 / - |
| NCBI Gene ID | LOC130993294 |
|---|---|
| GeneID | 130993294 |
| locus_tag | - |
| NCBI Name | LOC130993294 |
| 原始查询 | LOC130993294 |
| 来源 | GFF basic annotation; NCBI GO GAF; Arabidopsis/Rice homolog |
|---|---|
| 描述 | replicase polyprotein 1ab protein [Source:NCBI gene (formerly Entrezgene);Acc:819096]; symbol=AT2G44870; hit=AT2G44870; species=arabidopsis; confidence=high |
| 产物 | replicase polyprotein 1ab protein [Source:NCBI gene (formerly Entrezgene);Acc:819096]; symbol=AT2G44870; hit=AT2G44870; species=arabidopsis; confidence=high |
| Arabidopsis | AT2G44870 (AT2G44870)replicase polyprotein 1ab protein [Source:NCBI gene (formerly Entrezgene);Acc:819096] identity=66; qcov=0.948; evalue=7.54e-97; confidence=high |
| Rice | Os10g0569000- identity=47.7; qcov=0.355; evalue=2.59e-14; confidence=low |
| GO | GO:0009507 (chloroplast) |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130993294 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Chloroplast | 叶绿体 | 1.00000 | XP_057774112.1 |
| 2 | Chloroplast thylakoid | 类囊体 | 1.00000 | XP_057774112.1 |
| 3 | Chloroplast thylakoid membrane | 类囊体膜 | 0.80000 | XP_057774112.1 |
| 4 | Chloroplast membrane | 叶绿体膜 | 0.60000 | XP_057774112.1 |
| 5 | Nucleus | 细胞核 | 0.00000 | XP_057774112.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr7:20386375 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C50 |
Chr7:20387586 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | A16,C42 |
Chr7:20388537 |
GC |
G |
1bp_deletion | frameshift_variant | 1 | B125 |
Chr7:20388537 |
GC |
G |
1bp_deletion | CDS_variant | 1 | B125 |
Chr7:20388817 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B108 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。