当前解析结果
SmilChr07G002283| 统一新 Gene ID | SmilChr07G002283 |
|---|---|
| 名称 | SmilChr07G002283 |
| 描述 | uncharacterized SmilChr07G002283 |
| 染色体 / SeqID | Chr07 / NC_080393.1 |
| 坐标与链方向 | 21109914 - 21113782 / + |
| NCBI Gene ID | LOC130993364 |
|---|---|
| GeneID | 130993364 |
| locus_tag | - |
| NCBI Name | LOC130993364 |
| 原始查询 | LOC130993364 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:819267]; symbol=AT2G46550; hit=AT2G46550; species=arabidopsis; confidence=low |
| 产物 | uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:819267]; symbol=AT2G46550; hit=AT2G46550; species=arabidopsis; confidence=low |
| Arabidopsis | AT2G46550 (AT2G46550)uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:819267] identity=34.7; qcov=0.648; evalue=1.21e-36; confidence=low |
| Rice | Os08g0400300- identity=34; qcov=0.681; evalue=3.04e-30; confidence=low |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130993364 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus | 细胞核 | 0.80000 | XP_057774208.1 |
| 2 | Nucleus membrane | 核膜 | 0.60000 | XP_057774208.1 |
| 3 | Chromosome | 染色体 | 0.00000 | XP_057774208.1 |
| 4 | Centromere | 着丝粒 | 0.00000 | XP_057774208.1 |
| 5 | Chromatin | 染色质 | 0.00000 | XP_057774208.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr7:21111196 |
AC |
A |
1bp_deletion | frameshift_variant | 1 | B35 |
Chr7:21111196 |
AC |
A |
1bp_deletion | CDS_variant | 1 | B35 |
Chr7:21111218 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B70,C40,C55 |
Chr7:21111348 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | A18,C77 |
Chr7:21111547 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | A3,A9,B69,B72,C4 |
Chr7:21111606 |
G |
A |
EMS_canonical_SNV | stop_gained | 6 | A20,B118,C11,C54,C69,C75 |
Chr7:21111768 |
C |
T |
EMS_canonical_SNV | CDS_variant | 5 | A3,A9,B69,B72,C4 |
Chr7:21111779 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B12,B55 |
Chr7:21113220 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B140,B47,C47 |
Chr7:21113400 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B12,B55 |
Chr7:21113414 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | A2,B56,B96,C82 |
Chr7:21113547 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C52 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
2 records
下载 cDNA FASTA2 records
下载 CDS FASTA2 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。