当前解析结果
SmilChr07G002291| 统一新 Gene ID | SmilChr07G002291 |
|---|---|
| 名称 | SmilChr07G002291 |
| 描述 | protein DEFECTIVE IN MERISTEM SILENCING 3-like |
| 染色体 / SeqID | Chr07 / NC_080393.1 |
| 坐标与链方向 | 21188851 - 21193200 / + |
| NCBI Gene ID | LOC130993370 |
|---|---|
| GeneID | 130993370 |
| locus_tag | - |
| NCBI Name | LOC130993370 |
| 原始查询 | LOC130993370 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | protein DEFECTIVE IN MERISTEM SILENCING 3-like |
| 产物 | protein DEFECTIVE IN MERISTEM SILENCING 3-like |
| Arabidopsis | AT3G49250 (DMS3)defective in meristem silencing 3 [Source:NCBI gene (formerly Entrezgene);Acc:824086] identity=48.5; qcov=0.909; evalue=3.29e-124; confidence=high |
| Rice | Os01g0235200 (P0708G02.4-1)- identity=45.7; qcov=0.769; evalue=5.99e-117; confidence=high |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130993370 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus | 细胞核 | 1.00000 | XP_057774218.1 |
| 2 | Chromosome | 染色体 | 0.80000 | XP_057774218.1 |
| 3 | Nucleoplasm | 核质 | 0.40000 | XP_057774218.1 |
| 4 | Telomere | 端粒 | 0.20000 | XP_057774218.1 |
| 5 | Centromere | 着丝粒 | 0.00000 | XP_057774218.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr7:21188992 |
GC |
G |
1bp_deletion | frameshift_variant | 1 | B98 |
Chr7:21188992 |
GC |
G |
1bp_deletion | CDS_variant | 1 | B98 |
Chr7:21189033 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | B65,B73,C12,C83 |
Chr7:21191145 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B117 |
Chr7:21192109 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | B1,B93,C32,C68 |
Chr7:21192212 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | B104,B70,C40,C55 |
Chr7:21192558 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | A16 |
Chr7:21192560 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C8 |
Chr7:21192569 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B10,B113 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。