Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr07G002474`

染色体: Chr07 坐标: 23283641-23289195 链方向: + 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr07G002474`
名称	SmilChr07G002474
描述	65-kDa microtubule-associated protein 3-like
染色体 / SeqID	Chr07 / NC_080393.1
坐标与链方向	23283641 - 23289195 / `+`

ID 对照

NCBI Gene ID	`LOC130993552`
GeneID	`130993552`
locus_tag	`-`
NCBI Name	`LOC130993552`
原始查询	`LOC130993552`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	65-kDa microtubule-associated protein 3-like
产物	65-kDa microtubule-associated protein 3-like
Arabidopsis	`AT5G51600` (PLE) Microtubule associated protein (MAP65/ASE1) family protein [Source:NCBI gene (formerly Entrezgene);Acc:835234] identity=49.3; qcov=1.02; evalue=7.82e-176; confidence=high
Rice	`Os01g0685900` (P0478H03.31-1) - identity=51; qcov=1.01; evalue=0; confidence=high
GO	GO:0000226 (microtubule cytoskeleton organization); GO:0005737 (cytoplasm); GO:0005819 (spindle); GO:0008017 (microtubule binding)
KEGG	-
Pfam	PF03999 (MAP65_ASE1)
InterPro	-
eggNOG	-
NR	GeneID:130993552

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Chromosome	染色体	1.00000	`XP_057774464.1`
2	Nucleus	细胞核	1.00000	`XP_057774466.1`
3	Cytoskeleton	细胞骨架	1.00000	`XP_057774464.1`
4	Spindle	Spindle	1.00000	`XP_057774464.1`
5	Centromere	着丝粒	1.00000	`XP_057774466.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr7:23285259`	`GA`	`G`	1bp_deletion	frameshift_variant	5	B100,B41,B84,C37,D4
`Chr7:23285259`	`GA`	`G`	1bp_deletion	CDS_variant	5	B100,B41,B84,C37,D4
`Chr7:23286116`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	B131,C2
`Chr7:23286122`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	C15
`Chr7:23286123`	`G`	`A`	EMS_canonical_SNV	CDS_variant	2	B2,B76
`Chr7:23286162`	`G`	`A`	EMS_canonical_SNV	CDS_variant	5	A2,B35,B56,B73,B96
`Chr7:23286628`	`G`	`A`	EMS_canonical_SNV	CDS_variant	2	C72,D1
`Chr7:23286640`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	C72,D1
`Chr7:23288028`	`G`	`A`	EMS_canonical_SNV	CDS_variant	2	B2,B76
`Chr7:23288083`	`G`	`A`	EMS_canonical_SNV	CDS_variant	4	C14,C33,C45,C46
`Chr7:23288274`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	B2,B76
`Chr7:23288582`	`G`	`A`	EMS_canonical_SNV	CDS_variant	3	C15,C21,C83

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057774464.1

715 aa

358

715

MAP65_ASE1

PF03999 MAP65_ASE1 18-508 aa

XP_057774465.1

715 aa

358

715

MAP65_ASE1

PF03999 MAP65_ASE1 18-508 aa

XP_057774466.1

583 aa

292

583

MAP65_ASE1

PF03999 MAP65_ASE1 3-376 aa

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057774464.1`	Pfam	`PF03999`	MAP65_ASE1	Family	18	508	4.7e-102	342.9	Microtubule associated protein (MAP65/ASE1 family)
`XP_057774465.1`	Pfam	`PF03999`	MAP65_ASE1	Family	18	508	4.7e-102	342.9	Microtubule associated protein (MAP65/ASE1 family)
`XP_057774466.1`	Pfam	`PF03999`	MAP65_ASE1	Family	3	376	5e-77	260.4	Microtubule associated protein (MAP65/ASE1 family)

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

3 records

下载 cDNA FASTA

XM_057918481.1
TTACCATCTCCTCCGCCATTTGTCACAGCAGATAAATTAATCTCTCTTTCAAATTTAAACTTCGTCGAGCGCACATTATAGGATTTTAAACCCTCGTCAATTTTAGTATTTTTTTTGAAATTAACCCTCGTCAATTTTAACGGTCGGATTTTCCAAAAAATCGTACTCCCTGTTTCGTAGCTTTTCCTCGCGATCCCAACTTTCGCCTACACAATTTAACAAAGTAAGCATATGTCATTGCTTCTGCTTTTCGATTTTCA...

XM_057918482.1
ACCATCTCCTCCGCCATTTGTCACAGCAGATAAATTAATCTCTCTTTCAAATTTAAACTTCGTCGAGCGCACATTATAGGATTTTAAACCCTCGTCAATTTTAGTATTTTTTTTGAAATTAACCCTCGTCAATTTTAACGGTCGGATTTTCCAAAAAATCGTACTCCCTGTTTCGTAGCTTTTCCTCGCGATCCCAACTTTCGCCTACACAATTTAACAAAGTCTAGTCACCTTAAAATGTCAGACTGTCAAAGCAATGT...

CDS

3 records

下载 CDS FASTA

LOC130993552
ATGTCAGACTGTCAAAGCAATGTGCTTTTGCGCATGCAATCAGCATTTGGATCTCTTCTATATGAATTGCAGATGATATGGGAGGAGCTTGGGGAATCTGATGATGAAAGGTATAGGACGTTACTTGAACTTGAACAAGAATCTTTAGAAGTGTTCAGAAGAAAAGTAGATCAGGCAAACATGTGTAGAGCTCAGTTGAGGCTGGCAATCGCTGATGCTGAAGCAGAACTTGCTGCTATCTGCTCTGAAATAGGAGAGCA...

Protein

3 records

下载 Protein FASTA

XP_057774464.1
MSDCQSNVLLRMQSAFGSLLYELQMIWEELGESDDERYRTLLELEQESLEVFRRKVDQANMCRAQLRLAIADAEAELAAICSEIGEQPVHIRQSDRNPESLKAELRLILPKIEELRKRKNARKNQVSEVLTEMQSIKTEICSSDGFSSNEPATNGADLSTKKLEELRRDLQALRKEKSKRLKMTLDRLNSLHSLCVVLGLDFKEVVNKIHPSLAEAESSKNISNRTIEQLGDAIKQLRELKLQRMQQLQDLTTSLLELWD...

XP_057774465.1
MSDCQSNVLLRMQSAFGSLLYELQMIWEELGESDDERYRTLLELEQESLEVFRRKVDQANMCRAQLRLAIADAEAELAAICSEIGEQPVHIRQSDRNPESLKAELRLILPKIEELRKRKNARKNQVSEVLTEMQSIKTEICSSDGFSSNEPATNGADLSTKKLEELRRDLQALRKEKSKRLKMTLDRLNSLHSLCVVLGLDFKEVVNKIHPSLAEAESSKNISNRTIEQLGDAIKQLRELKLQRMQQLQDLTTSLLELWD...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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