当前解析结果
SmilChr07G002524| 统一新 Gene ID | SmilChr07G002524 |
|---|---|
| 名称 | SmilChr07G002524 |
| 描述 | uncharacterized SmilChr07G002524 |
| 染色体 / SeqID | Chr07 / NC_080393.1 |
| 坐标与链方向 | 23924054 - 23927100 / - |
| NCBI Gene ID | LOC130993599 |
|---|---|
| GeneID | 130993599 |
| locus_tag | - |
| NCBI Name | LOC130993599 |
| 原始查询 | LOC130993599 |
| 来源 | GFF basic annotation; NCBI GO GAF; Arabidopsis/Rice homolog |
|---|---|
| 描述 | uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:843387]; symbol=AT1G70505; hit=AT1G70505; species=arabidopsis; confidence=high |
| 产物 | uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:843387]; symbol=AT1G70505; hit=AT1G70505; species=arabidopsis; confidence=high |
| Arabidopsis | AT1G70505 (AT1G70505)uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:843387] identity=47.7; qcov=0.984; evalue=1.38e-97; confidence=high |
| Rice | Os02g0130600- identity=42.1; qcov=0.994; evalue=5.47e-85; confidence=medium |
| GO | GO:0016020 (membrane) |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130993599 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Cell membrane | 细胞膜 | 1.00000 | XP_057774516.1 |
| 2 | Endosome | 内体 | 0.40000 | XP_057774516.1 |
| 3 | Endoplasmic reticulum | 内质网 | 0.20000 | XP_057774517.1 |
| 4 | Endosome membrane | 内体膜 | 0.20000 | XP_057774518.1 |
| 5 | Nucleus | 细胞核 | 0.00000 | XP_057774518.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr7:23925085 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | D3 |
Chr7:23925557 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | C15,C21 |
Chr7:23925580 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B67 |
Chr7:23925665 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B105 |
Chr7:23926258 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B10,C46 |
Chr7:23926341 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B28 |
Chr7:23926351 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B28 |
Chr7:23926386 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B81 |
Chr7:23926740 |
T |
TA |
1bp_insertion | frameshift_variant | 4 | B122,B91,C66,C74 |
Chr7:23926740 |
T |
TA |
1bp_insertion | CDS_variant | 4 | B122,B91,C66,C74 |
Chr7:23926778 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | B44,B85,C11,C54 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
4 records
下载 cDNA FASTA4 records
下载 CDS FASTA4 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。