Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr07G002534`

染色体: Chr07 坐标: 24043285-24047163 链方向: + 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr07G002534`
名称	SmilChr07G002534
描述	ADP-ribosylation factor 2-like
染色体 / SeqID	Chr07 / NC_080393.1
坐标与链方向	24043285 - 24047163 / `+`

ID 对照

NCBI Gene ID	`LOC130993611`
GeneID	`130993611`
locus_tag	`-`
NCBI Name	`LOC130993611`
原始查询	`LOC130993611`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; NCBI GO GAF; KEGG smil; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	ADP-ribosylation factor 2-like
产物	ADP-ribosylation factor 2-like
Arabidopsis	`AT3G62290` (ARFA1E) ADP-ribosylation factor A1E [Source:NCBI gene (formerly Entrezgene);Acc:825402] identity=100; qcov=1; evalue=4.79e-122; confidence=high
Rice	`Os05g0489600` (ARF) - identity=99.4; qcov=1; evalue=7.51e-122; confidence=high
GO	GO:0003924 (GTPase activity); GO:0005525 (GTP binding); GO:0005737 (cytoplasm); GO:0006886 (intracellular protein transport); GO:0016192 (vesicle-mediated transport)
KEGG	smil04144 (Endocytosis - Salvia miltiorrhiza (redroot sage))
Pfam	PF00025 (Arf); PF00071 (Ras); PF01926 (MMR_HSR1); PF04670 (Gtr1_RagA); PF08477 (Roc); PF09439 (SRPRB)
InterPro	-
eggNOG	-
NR	GeneID:130993611

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Cytosol	细胞质基质	1.00000	`XP_057774530.1`
2	Endosome	内体	1.00000	`XP_057774530.1`
3	Golgi apparatus	高尔基体	0.80000	`XP_057774530.1`
4	Vesicle	囊泡	0.80000	`XP_057774531.1`
5	Trans-golgi network	Trans-golgi network	0.60000	`XP_057774530.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr7:24045284`	`C`	`T`	EMS_canonical_SNV	CDS_variant	4	A11,B128,B66,C61
`Chr7:24046088`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B49

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057774530.1

166 aa

166

Arf

MMR_HSR1

Roc

Gtr1_RagA

SRPRB

Ras

PF00025 Arf 1-160 aa PF01926 MMR_HSR1 2-105 aa PF08477 Roc 2-112 aa PF04670 Gtr1_RagA 2-124 aa PF09439 SRPRB 2-126 aa PF00071 Ras 2-157 aa

XP_057774531.1

166 aa

166

Arf

MMR_HSR1

Roc

Gtr1_RagA

SRPRB

Ras

PF00025 Arf 1-160 aa PF01926 MMR_HSR1 2-105 aa PF08477 Roc 2-112 aa PF04670 Gtr1_RagA 2-124 aa PF09439 SRPRB 2-126 aa PF00071 Ras 2-157 aa

XP_057774532.1

166 aa

166

Arf

MMR_HSR1

Roc

Gtr1_RagA

SRPRB

Ras

PF00025 Arf 1-160 aa PF01926 MMR_HSR1 2-105 aa PF08477 Roc 2-112 aa PF04670 Gtr1_RagA 2-124 aa PF09439 SRPRB 2-126 aa PF00071 Ras 2-157 aa

XP_057774533.1

164 aa

164

Arf

MMR_HSR1

Roc

Gtr1_RagA

SRPRB

Ras

PF00025 Arf 1-160 aa PF01926 MMR_HSR1 2-105 aa PF08477 Roc 2-112 aa PF04670 Gtr1_RagA 2-124 aa PF09439 SRPRB 2-126 aa PF00071 Ras 2-157 aa

XP_057774534.1

164 aa

164

Arf

MMR_HSR1

Roc

Gtr1_RagA

SRPRB

Ras

PF00025 Arf 1-160 aa PF01926 MMR_HSR1 2-105 aa PF08477 Roc 2-112 aa PF04670 Gtr1_RagA 2-124 aa PF09439 SRPRB 2-126 aa PF00071 Ras 2-157 aa

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057774530.1`	Pfam	`PF00025`	Arf	Domain	1	160	2.4e-78	262.3	ADP-ribosylation factor family
`XP_057774530.1`	Pfam	`PF01926`	MMR_HSR1	Family	2	105	5.2e-05	24.0	50S ribosome-binding GTPase
`XP_057774530.1`	Pfam	`PF08477`	Roc	Domain	2	112	5.5e-14	53.1	Ras of Complex, Roc, domain of DAPkinase
`XP_057774530.1`	Pfam	`PF04670`	Gtr1_RagA	Domain	2	124	1.2e-09	38.7	Gtr1/RagA G protein conserved region
`XP_057774530.1`	Pfam	`PF09439`	SRPRB	Domain	2	126	1.1e-12	48.4	Signal recognition particle receptor beta subunit
`XP_057774530.1`	Pfam	`PF00071`	Ras	Domain	2	157	4e-12	46.7	Ras family
`XP_057774531.1`	Pfam	`PF00025`	Arf	Domain	1	160	2.4e-78	262.3	ADP-ribosylation factor family
`XP_057774531.1`	Pfam	`PF01926`	MMR_HSR1	Family	2	105	5.2e-05	24.1	50S ribosome-binding GTPase
`XP_057774531.1`	Pfam	`PF08477`	Roc	Domain	2	112	5.5e-14	53.1	Ras of Complex, Roc, domain of DAPkinase
`XP_057774531.1`	Pfam	`PF04670`	Gtr1_RagA	Domain	2	124	1.2e-09	38.7	Gtr1/RagA G protein conserved region
`XP_057774531.1`	Pfam	`PF09439`	SRPRB	Domain	2	126	1.1e-12	48.4	Signal recognition particle receptor beta subunit
`XP_057774531.1`	Pfam	`PF00071`	Ras	Domain	2	157	3.9e-12	46.7	Ras family
`XP_057774532.1`	Pfam	`PF00025`	Arf	Domain	1	160	2.4e-78	262.3	ADP-ribosylation factor family
`XP_057774532.1`	Pfam	`PF01926`	MMR_HSR1	Family	2	105	5.2e-05	24.0	50S ribosome-binding GTPase
`XP_057774532.1`	Pfam	`PF08477`	Roc	Domain	2	112	5.5e-14	53.1	Ras of Complex, Roc, domain of DAPkinase
`XP_057774532.1`	Pfam	`PF04670`	Gtr1_RagA	Domain	2	124	1.2e-09	38.7	Gtr1/RagA G protein conserved region
`XP_057774532.1`	Pfam	`PF09439`	SRPRB	Domain	2	126	1.1e-12	48.4	Signal recognition particle receptor beta subunit
`XP_057774532.1`	Pfam	`PF00071`	Ras	Domain	2	157	4e-12	46.7	Ras family
`XP_057774533.1`	Pfam	`PF00025`	Arf	Domain	1	160	2.3e-78	262.3	ADP-ribosylation factor family
`XP_057774533.1`	Pfam	`PF01926`	MMR_HSR1	Family	2	105	5e-05	24.1	50S ribosome-binding GTPase
`XP_057774533.1`	Pfam	`PF08477`	Roc	Domain	2	112	5.4e-14	53.2	Ras of Complex, Roc, domain of DAPkinase
`XP_057774533.1`	Pfam	`PF04670`	Gtr1_RagA	Domain	2	124	1.2e-09	38.7	Gtr1/RagA G protein conserved region
`XP_057774533.1`	Pfam	`PF09439`	SRPRB	Domain	2	126	1.1e-12	48.4	Signal recognition particle receptor beta subunit
`XP_057774533.1`	Pfam	`PF00071`	Ras	Domain	2	157	3.8e-12	46.8	Ras family
`XP_057774534.1`	Pfam	`PF00025`	Arf	Domain	1	160	2.3e-78	262.3	ADP-ribosylation factor family
`XP_057774534.1`	Pfam	`PF01926`	MMR_HSR1	Family	2	105	5e-05	24.1	50S ribosome-binding GTPase
`XP_057774534.1`	Pfam	`PF08477`	Roc	Domain	2	112	5.4e-14	53.2	Ras of Complex, Roc, domain of DAPkinase
`XP_057774534.1`	Pfam	`PF04670`	Gtr1_RagA	Domain	2	124	1.2e-09	38.7	Gtr1/RagA G protein conserved region
`XP_057774534.1`	Pfam	`PF09439`	SRPRB	Domain	2	126	1.1e-12	48.4	Signal recognition particle receptor beta subunit
`XP_057774534.1`	Pfam	`PF00071`	Ras	Domain	2	157	3.8e-12	46.8	Ras family

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

5 records

下载 cDNA FASTA

XM_057918551.1
GAAAATGATGTGGCAAGATCGTAATTCATTGGCCAGCTCAACCCAAATGGAATCGACGGCGAATAATTTCCAGAAACAGTGTCATTTCTAAAAGGGCAACGCTGTTATTTTAGACAGGATCTGGTGGCAACGTGGTCATTTGATTAACATCCGGTTGCGGCATTCCGATATAAATATCCGCTGGCTGAAATTTCTCATTGCTACTTCTCAGAAAAGGAAAATAGAAAGTTTATAATCTATCGCGTTGTTCTGAAGCAGCT...

XM_057918550.1
GCTCAACCCAAATGGAATCGACGGCGAATAATTTCCAGAAACAGTGTCATTTCTAAAAGGGCAACGCTGTTATTTTAGACAGGATCTGGTGGCAACGTGGTCATTTGATTAACATCCGGTTGCGGCATTCCGATATAAATATCCGCTGGCTGAAATTTCTCATTGCTACTTCTCAGAAAAGGAAAATAGAAAGTTTATAATCTATCGCGTTGTTCTGAAGCAGCTCCCTATTTCTCCGCGTACGCTCTCTACCACCTCCC...

CDS

5 records

下载 CDS FASTA

LOC130993611
ATGCGGATTTTGATGGTTGGTCTTGATGCTGCTGGTAAGACAACCATCCTGTACAAGCTCAAGCTCGGAGAGATTGTCACCACCATTCCAACCATTGGTTTCAATGTGGAGACTGTCGAATACAAGAACATTAGCTTCACAGTTTGGGATGTTGGGGGTCAGGACAAGATCCGCCCATTGTGGAGGCACTACTTCCAAAACACACAGGGTCTCATATTTGTGGTGGACAGTAATGACAGGGACCGTGTTGTGGAGGCAAG...

Protein

5 records

下载 Protein FASTA

XP_057774530.1
MRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANKGGR

XP_057774531.1
MRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANKASS

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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