Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr07G002593`

染色体: Chr07 坐标: 24927043-24931011 链方向: - 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr07G002593`
名称	SmilChr07G002593
描述	uncharacterized SmilChr07G002593
染色体 / SeqID	Chr07 / NC_080393.1
坐标与链方向	24927043 - 24931011 / `-`

ID 对照

NCBI Gene ID	`LOC130993662`
GeneID	`130993662`
locus_tag	`-`
NCBI Name	`LOC130993662`
原始查询	`LOC130993662`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; Arabidopsis/Rice homolog
描述	NHL domain-containing protein [Source:NCBI gene (formerly Entrezgene);Acc:839000]; symbol=AT1G23890; hit=AT1G23890; species=arabidopsis; confidence=high
产物	NHL domain-containing protein [Source:NCBI gene (formerly Entrezgene);Acc:839000]; symbol=AT1G23890; hit=AT1G23890; species=arabidopsis; confidence=high
Arabidopsis	`AT1G23890` (AT1G23890) NHL domain-containing protein [Source:NCBI gene (formerly Entrezgene);Acc:839000] identity=48.3; qcov=0.96; evalue=4.48e-78; confidence=high
Rice	`Os08g0414600` - identity=41.2; qcov=0.899; evalue=5.49e-53; confidence=medium
GO	-
KEGG	-
Pfam	-
InterPro	-
eggNOG	-
NR	GeneID:130993662

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Endoplasmic reticulum	内质网	1.00000	`XP_057774631.1`
2	Cell membrane	细胞膜	0.80000	`XP_057774632.1`
3	Vacuole	液泡	0.40000	`XP_057774632.1`
4	Vacuole membrane	液泡膜	0.40000	`XP_057774632.1`
5	Endoplasmic reticulum membrane	内质网膜	0.20000	`XP_057774631.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr7:24927204`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B88
`Chr7:24927332`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	D11
`Chr7:24927336`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	B102,C14
`Chr7:24927580`	`C`	`T`	EMS_canonical_SNV	CDS_variant	3	B121,B18,C45
`Chr7:24927639`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B102
`Chr7:24927686`	`C`	`T`	EMS_canonical_SNV	stop_gained	1	B102
`Chr7:24927686`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B102
`Chr7:24927860`	`G`	`A`	EMS_canonical_SNV	CDS_variant	3	B115,B88,C65
`Chr7:24928128`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	C61
`Chr7:24930665`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	B112,D11

进入 EMS 突变库

预测功能结构域

当前发布数据中，此基因没有可展示的 Pfam 结构域命中。

进入结构域查询

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

3 records

下载 cDNA FASTA

XM_057918649.1
GAAAAAAAAAATGAGGTATTATCTTAGGGTAACATTGCATTTTTCACTTCAGTTCAGCACATACTTTTCCATCATCTCTCTCTATCTCTCCCTGCAAATCGACCATGGCGTCTTCAATCTTTTCCGTCTTTTTCGTCATTATATTCCTGCAATTTTGTTTGATTCTAACTCAAGTGGCAGGTAGAAGTAGTGGGGAACTCATTTATGAAGACGGCTACACAGTCACCACAATCATCGACGGCGACAAGTCAAACGTCAAG...

XM_057918648.1
ATGAGGTATTATCTTAGGGTAACATTGCATTTTTCACTTCAGTTCAGCACATACTTTTCCATCATCTCTCTCTATCTCTCCCTGCAAATCGACCATGGCGTCTTCAATCTTTTCCGTCTTTTTCGTCATTATATTCCTGCAATTTTGTTTGATTCTAACTCAAGTGGCAGGTAGAAGTAGTGGGGAACTCATTTATGAAGACGGCTACACAGTCACCACAATCATCGACGGCGACAAGTCAAACGTCAAGGTCAACCCTC...

CDS

3 records

下载 CDS FASTA

LOC130993662
ATGGCGTCTTCAATCTTTTCCGTCTTTTTCGTCATTATATTCCTGCAATTTTGTTTGATTCTAACTCAAGTGGCAGGTAGAAGTAGTGGGGAACTCATTTATGAAGACGGCTACACAGTCACCACAATCATCGACGGCGACAAGTCAAACGTCAAGGTCAACCCTCAGTCGATCATCCATCAATCTCCGCCGTCCGATCTCTTCATCATTCTCGACTCCGTTGACAGCACTTTCTACACCGCATTGCTGCCCACGACCTC...

Protein

3 records

下载 Protein FASTA

XP_057774629.1
MASSIFSVFFVIIFLQFCLILTQVAGRSSGELIYEDGYTVTTIIDGDKSNVKVNPQSIIHQSPPSDLFIILDSVDSTFYTALLPTTSNETVIKKLAGNKVFGYVDGDLASAKFHKPKSFAVDLNGNIYVADHLNHAIRKITKSGVTTIAGGYSQKAGRADGPARDALFSDDFELIFSSEICALLISDHGNRLVRQISLKAEDCSRQSGSVLGTTSAWLLGLGLCSLISLAVGLVIRPYVIPYEGVRPHQPPWTWTHCRMS...

XP_057774631.1
MASSIFSVFFVIIFLQFCLILTQVAGRSSGELIYEDGYTVTTIIDGDKSNVKVNPQSIIHQSPPSDLFIILDSVDSTFYTALLPTTSNGVTTIAGGYSQKAGRADGPARDALFSDDFELIFSSEICALLISDHGNRLVRQISLKAEDCSRQSGSVLGTTSAWLLGLGLCSLISLAVGLVIRPYVIPYEGVRPHQPPWTWTHCRMSLERQVVMLCSDLRSAVVKSTVYLRSHQIILLVLSHLSLMFRRTPLESRASCRKIV...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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