当前解析结果
SmilChr07G000930| 统一新 Gene ID | SmilChr07G000930 |
|---|---|
| 名称 | SmilChr07G000930 |
| 描述 | uncharacterized SmilChr07G000930 |
| 染色体 / SeqID | Chr07 / NC_080393.1 |
| 坐标与链方向 | 6631624 - 6633321 / - |
| NCBI Gene ID | LOC130993759 |
|---|---|
| GeneID | 130993759 |
| locus_tag | - |
| NCBI Name | LOC130993759 |
| 原始查询 | LOC130993759 |
| 来源 | GFF basic annotation; NCBI GO GAF; Arabidopsis/Rice homolog |
|---|---|
| 描述 | Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein family [Source:NCBI gene (formerly Entrezgene);Acc:2745571]; symbol=AT2G30505; hit=AT2G30505; species=arabidopsis; confidence=low |
| 产物 | Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein family [Source:NCBI gene (formerly Entrezgene);Acc:2745571]; symbol=AT2G30505; hit=AT2G30505; species=arabidopsis; confidence=low |
| Arabidopsis | AT2G30505 (AT2G30505)Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein family [Source:NCBI gene (formerly Entrezgene);Acc:2745571] identity=27.3; qcov=0.815; evalue=2.54e-19; confidence=low |
| Rice | Os01g0574800- identity=25.4; qcov=0.597; evalue=1.22e-06; confidence=low |
| GO | GO:0005886 (plasma membrane) |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130993759 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Cell membrane | 细胞膜 | 1.00000 | XP_057774779.1 |
| 2 | Nucleus | 细胞核 | 0.00000 | XP_057774779.1 |
| 3 | Chromosome | 染色体 | 0.00000 | XP_057774779.1 |
| 4 | Centromere | 着丝粒 | 0.00000 | XP_057774779.1 |
| 5 | Chromatin | 染色质 | 0.00000 | XP_057774779.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr7:6632633 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C60 |
Chr7:6632643 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | B13,B98,C48,C80 |
Chr7:6632683 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B95 |
Chr7:6632791 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B140,B69,C58 |
Chr7:6632850 |
C |
T |
EMS_canonical_SNV | CDS_variant | 5 | B102,B138,B50,C44,D3 |
Chr7:6632877 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B25,C16 |
Chr7:6632904 |
G |
A |
EMS_canonical_SNV | stop_gained | 2 | B135,B61 |
Chr7:6632904 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B135,B61 |
Chr7:6632941 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B15,B50,C10 |
Chr7:6632961 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | A19,B138,D3 |
Chr7:6632994 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | B58,C52,C69,C75 |
Chr7:6633033 |
G |
A |
EMS_canonical_SNV | stop_gained | 8 | A7,B124,B134,B28,B30,B76,C25,C41 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。