当前解析结果
SmilChr07G001697| 统一新 Gene ID | SmilChr07G001697 |
|---|---|
| 名称 | SmilChr07G001697 |
| 描述 | uncharacterized SmilChr07G001697 |
| 染色体 / SeqID | Chr07 / NC_080393.1 |
| 坐标与链方向 | 14414444 - 14416133 / - |
| NCBI Gene ID | LOC130993857 |
|---|---|
| GeneID | 130993857 |
| locus_tag | - |
| NCBI Name | LOC130993857 |
| 原始查询 | LOC130993857 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | hit=Os06g0521000; species=rice; confidence=low |
| 产物 | hit=Os06g0521000; species=rice; confidence=low |
| Arabidopsis | AT1G66235 (AT1G66235)no-apical-meristem-associated carboxy-terminal domain protein [Source:NCBI gene (formerly Entrezgene);Acc:842939] identity=25.4; qcov=0.718; evalue=1.26e-10; confidence=low |
| Rice | Os06g0521000- identity=30.3; qcov=0.729; evalue=9.88e-17; confidence=low |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130993857 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus | 细胞核 | 1.00000 | XP_057774877.1 |
| 2 | Chromosome | 染色体 | 0.00000 | XP_057774877.1 |
| 3 | Centromere | 着丝粒 | 0.00000 | XP_057774877.1 |
| 4 | Chromatin | 染色质 | 0.00000 | XP_057774877.1 |
| 5 | Telomere | 端粒 | 0.00000 | XP_057774877.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr7:14415625 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B130,B99 |
Chr7:14415633 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B13,B70,C75 |
Chr7:14415640 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B114,B15,C10 |
Chr7:14415642 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | A25 |
Chr7:14415657 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | A15,C57 |
Chr7:14415676 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B44 |
Chr7:14415685 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B118 |
Chr7:14415703 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | A4,B105 |
Chr7:14415704 |
G |
A |
EMS_canonical_SNV | stop_gained | 10 | A10,A20,B1,B27,B44,B47,B49,C47,C6,D5 |
Chr7:14415710 |
C |
T |
EMS_canonical_SNV | CDS_variant | 5 | B61,B70,C49,C50,C55 |
Chr7:14415728 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | A15 |
Chr7:14415733 |
TC |
T |
1bp_deletion | frameshift_variant | 3 | A20,B49,D7 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。