当前解析结果
SmilChr07G001699| 统一新 Gene ID | SmilChr07G001699 |
|---|---|
| 名称 | SmilChr07G001699 |
| 描述 | uncharacterized SmilChr07G001699 |
| 染色体 / SeqID | Chr07 / NC_080393.1 |
| 坐标与链方向 | 14422284 - 14425221 / + |
| NCBI Gene ID | LOC130993858 |
|---|---|
| GeneID | 130993858 |
| locus_tag | - |
| NCBI Name | LOC130993858 |
| 原始查询 | LOC130993858 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | Ulp1 protease family protein [Source:NCBI gene (formerly Entrezgene);Acc:832997]; symbol=AT5G28810; hit=AT5G28810; species=arabidopsis; confidence=weak |
| 产物 | Ulp1 protease family protein [Source:NCBI gene (formerly Entrezgene);Acc:832997]; symbol=AT5G28810; hit=AT5G28810; species=arabidopsis; confidence=weak |
| Arabidopsis | AT5G28810 (AT5G28810)Ulp1 protease family protein [Source:NCBI gene (formerly Entrezgene);Acc:832997] identity=30.2; qcov=0.145; evalue=5.82e-09; confidence=weak |
| Rice | -- |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130993858 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus | 细胞核 | 1.00000 | XP_057774878.1 |
| 2 | Nucleoplasm | 核质 | 0.80000 | XP_057774878.1 |
| 3 | Chromosome | 染色体 | 0.40000 | XP_057774878.1 |
| 4 | Nuclear body | 核内小体 | 0.20000 | XP_057774878.1 |
| 5 | Centromere | 着丝粒 | 0.00000 | XP_057774878.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr7:14422302 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | A11,C1,C72 |
Chr7:14422335 |
C |
T |
EMS_canonical_SNV | stop_gained | 3 | B66,D2,D7 |
Chr7:14422335 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B66,D2,D7 |
Chr7:14422345 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | B46,B68,B85,D2 |
Chr7:14422375 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | C8,D4 |
Chr7:14422376 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B85,C77 |
Chr7:14422379 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B12,C11 |
Chr7:14422381 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | B12,B46,C11,C8 |
Chr7:14422382 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | A23,B70 |
Chr7:14422826 |
C |
T |
EMS_canonical_SNV | CDS_variant | 5 | A23,B22,B44,B91,C76 |
Chr7:14422827 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | B45,B63,B83,C17 |
Chr7:14422871 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | A25,B44,C17,C21 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。