当前解析结果
SmilChr07G002595| 统一新 Gene ID | SmilChr07G002595 |
|---|---|
| 名称 | SmilChr07G002595 |
| 描述 | uncharacterized SmilChr07G002595 |
| 染色体 / SeqID | Chr07 / NC_080393.1 |
| 坐标与链方向 | 24946035 - 24946724 / - |
| NCBI Gene ID | LOC130994005 |
|---|---|
| GeneID | 130994005 |
| locus_tag | - |
| NCBI Name | LOC130994005 |
| 原始查询 | LOC130994005 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | microtubule-associated protein [Source:NCBI gene (formerly Entrezgene);Acc:828946]; symbol=AT4G28310; hit=AT4G28310; species=arabidopsis; confidence=medium |
| 产物 | microtubule-associated protein [Source:NCBI gene (formerly Entrezgene);Acc:828946]; symbol=AT4G28310; hit=AT4G28310; species=arabidopsis; confidence=medium |
| Arabidopsis | AT4G28310 (AT4G28310)microtubule-associated protein [Source:NCBI gene (formerly Entrezgene);Acc:828946] identity=43.9; qcov=1; evalue=1.74e-46; confidence=medium |
| Rice | Os06g0115700 (OSJNBa0019F11.18-1)- identity=68.9; qcov=0.323; evalue=1.54e-31; confidence=low |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130994005 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus | 细胞核 | 1.00000 | XP_057775023.1 |
| 2 | Nucleoplasm | 核质 | 0.20000 | XP_057775023.1 |
| 3 | Chromosome | 染色体 | 0.00000 | XP_057775023.1 |
| 4 | Centromere | 着丝粒 | 0.00000 | XP_057775023.1 |
| 5 | Chromatin | 染色质 | 0.00000 | XP_057775023.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr7:24946040 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | A16,B134,B61,C8,C82 |
Chr7:24946072 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | D11 |
Chr7:24946130 |
TC |
T |
1bp_deletion | frameshift_variant | 4 | A11,B59,C57,C62 |
Chr7:24946130 |
TC |
T |
1bp_deletion | CDS_variant | 4 | A11,B59,C57,C62 |
Chr7:24946146 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B122 |
Chr7:24946249 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C78 |
Chr7:24946263 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C78 |
Chr7:24946273 |
CT |
C |
1bp_deletion | frameshift_variant | 1 | A14 |
Chr7:24946273 |
CT |
C |
1bp_deletion | CDS_variant | 1 | A14 |
Chr7:24946316 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | B133,B58,B66,C42 |
Chr7:24946334 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | A14,B111,B34,B45 |
Chr7:24946370 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | A19 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。