当前解析结果
SmilChr07G003021| 统一新 Gene ID | SmilChr07G003021 |
|---|---|
| 名称 | SmilChr07G003021 |
| 描述 | uncharacterized SmilChr07G003021 |
| 染色体 / SeqID | Chr07 / NC_080393.1 |
| 坐标与链方向 | 31251447 - 31251920 / - |
| NCBI Gene ID | LOC130994087 |
|---|---|
| GeneID | 130994087 |
| locus_tag | - |
| NCBI Name | LOC130994087 |
| 原始查询 | LOC130994087 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | zinc ion binding / nucleic acid binding protein [Source:NCBI gene (formerly Entrezgene);Acc:814629]; symbol=AT2G01050; hit=AT2G01050; species=arabidopsis; confidence=low |
| 产物 | zinc ion binding / nucleic acid binding protein [Source:NCBI gene (formerly Entrezgene);Acc:814629]; symbol=AT2G01050; hit=AT2G01050; species=arabidopsis; confidence=low |
| Arabidopsis | AT2G01050 (AT2G01050)zinc ion binding / nucleic acid binding protein [Source:NCBI gene (formerly Entrezgene);Acc:814629] identity=31; qcov=0.924; evalue=3.85e-22; confidence=low |
| Rice | Os09g0268800- identity=25.4; qcov=0.854; evalue=2.13e-07; confidence=low |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130994087 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Cytoplasm | 细胞质 | 0.60000 | XP_057775104.1 |
| 2 | Chloroplast | 叶绿体 | 0.40000 | XP_057775104.1 |
| 3 | Cytosol | 细胞质基质 | 0.20000 | XP_057775104.1 |
| 4 | Nucleus | 细胞核 | 0.00000 | XP_057775104.1 |
| 5 | Chromosome | 染色体 | 0.00000 | XP_057775104.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr7:31251479 |
G |
A |
EMS_canonical_SNV | stop_gained | 8 | B10,B2,B37,C3,C34,C43,D10,D2 |
Chr7:31251511 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | B107,B7,B93,C36,C5 |
Chr7:31251522 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | B31,B50,B52,C27,C56 |
Chr7:31251589 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B2 |
Chr7:31251590 |
C |
T |
EMS_canonical_SNV | CDS_variant | 5 | B107,B7,B93,C36,C5 |
Chr7:31251594 |
C |
T |
EMS_canonical_SNV | CDS_variant | 5 | B107,B7,B93,C36,C5 |
Chr7:31251621 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | B113,B53,C64,D4,D6 |
Chr7:31251625 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B27 |
Chr7:31251626 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | B44,C19,C31,C35 |
Chr7:31251629 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | A7,C84 |
Chr7:31251644 |
C |
T |
EMS_canonical_SNV | CDS_variant | 5 | B107,B7,B93,C36,C5 |
Chr7:31251660 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B55,B91 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。