当前解析结果
SmilChr07G003156| 统一新 Gene ID | SmilChr07G003156 |
|---|---|
| 名称 | SmilChr07G003156 |
| 描述 | uncharacterized SmilChr07G003156 |
| 染色体 / SeqID | Chr07 / NC_080393.1 |
| 坐标与链方向 | 33485987 - 33486728 / + |
| NCBI Gene ID | LOC130994119 |
|---|---|
| GeneID | 130994119 |
| locus_tag | - |
| NCBI Name | LOC130994119 |
| 原始查询 | LOC130994119 |
| 来源 | GFF basic annotation; NCBI GO GAF; Arabidopsis/Rice homolog |
|---|---|
| 描述 | UDP-Glycosyltransferase superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:843709]; symbol=AT1G73740; hit=AT1G73740; species=arabidopsis; confidence=medium |
| 产物 | UDP-Glycosyltransferase superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:843709]; symbol=AT1G73740; hit=AT1G73740; species=arabidopsis; confidence=medium |
| Arabidopsis | AT1G73740 (AT1G73740)UDP-Glycosyltransferase superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:843709] identity=46.8; qcov=1.02; evalue=1.02e-41; confidence=medium |
| Rice | Os01g0516700- identity=37.6; qcov=0.976; evalue=1.33e-29; confidence=medium |
| GO | GO:0016757 (glycosyltransferase activity) |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130994119 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Cytoplasm | 细胞质 | 0.60000 | XP_057775138.1 |
| 2 | Cytosol | 细胞质基质 | 0.20000 | XP_057775138.1 |
| 3 | Chloroplast | 叶绿体 | 0.20000 | XP_057775138.1 |
| 4 | Peroxisome | 过氧化物酶体 | 0.20000 | XP_057775138.1 |
| 5 | Nucleus | 细胞核 | 0.00000 | XP_057775138.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr7:33486008 |
C |
T |
EMS_canonical_SNV | stop_gained | 30 | A19,A20,B104,B121,B125,B126,B131,B132,B21,B25,B51,B53,B71,B75,B76,B89,B90,C1,C11,C2,C21,C27,C3,C51,C54,C65,C69,C70,C86,C87 |
Chr7:33486028 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B78,D7 |
Chr7:33486037 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B24,B53 |
Chr7:33486054 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | B113,B69,B72,C1 |
Chr7:33486081 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B69,C53 |
Chr7:33486125 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | C68,C70,D3 |
Chr7:33486140 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B69 |
Chr7:33486146 |
CTG |
C |
2bp_deletion | frameshift_variant | 7 | B13,B66,C3,C32,C42,C53,C77 |
Chr7:33486187 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B25,B29,C60 |
Chr7:33486200 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B69 |
Chr7:33486286 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | B115,B126,C39,C43,C71 |
Chr7:33486340 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B54,D4 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。