当前解析结果
SmilChr07G003349| 统一新 Gene ID | SmilChr07G003349 |
|---|---|
| 名称 | SmilChr07G003349 |
| 描述 | uncharacterized SmilChr07G003349 |
| 染色体 / SeqID | Chr07 / NC_080393.1 |
| 坐标与链方向 | 35950133 - 35950489 / + |
| NCBI Gene ID | LOC130994164 |
|---|---|
| GeneID | 130994164 |
| locus_tag | - |
| NCBI Name | LOC130994164 |
| 原始查询 | LOC130994164 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | Alpha/beta hydrolase related protein [Source:NCBI gene (formerly Entrezgene);Acc:818598]; symbol=AT2G40095; hit=AT2G40095; species=arabidopsis; confidence=low |
| 产物 | Alpha/beta hydrolase related protein [Source:NCBI gene (formerly Entrezgene);Acc:818598]; symbol=AT2G40095; hit=AT2G40095; species=arabidopsis; confidence=low |
| Arabidopsis | AT2G40095 (AT2G40095)Alpha/beta hydrolase related protein [Source:NCBI gene (formerly Entrezgene);Acc:818598] identity=50; qcov=0.915; evalue=3.06e-20; confidence=low |
| Rice | Os01g0647700- identity=39.4; qcov=0.602; evalue=3.64e-08; confidence=low |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130994164 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus membrane | 核膜 | 0.40000 | XP_057775180.1 |
| 2 | Nucleus | 细胞核 | 0.20000 | XP_057775180.1 |
| 3 | Cytoplasm | 细胞质 | 0.20000 | XP_057775180.1 |
| 4 | Endoplasmic reticulum | 内质网 | 0.20000 | XP_057775180.1 |
| 5 | Lipid droplet | 脂滴 | 0.20000 | XP_057775180.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr7:35950151 |
G |
GA |
1bp_insertion | frameshift_variant | 2 | A7,C6 |
Chr7:35950151 |
G |
GA |
1bp_insertion | CDS_variant | 2 | A7,C6 |
Chr7:35950164 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B103 |
Chr7:35950210 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B41 |
Chr7:35950274 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B78 |
Chr7:35950301 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B14,B67,C76 |
Chr7:35950335 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | A1,B117,C53 |
Chr7:35950342 |
C |
T |
EMS_canonical_SNV | CDS_variant | 5 | B62,B94,C31,C34,C76 |
Chr7:35950409 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B132,C1 |
Chr7:35950447 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | D6 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。