当前解析结果
SmilChr07G003637| 统一新 Gene ID | SmilChr07G003637 |
|---|---|
| 名称 | SmilChr07G003637 |
| 描述 | uncharacterized SmilChr07G003637 |
| 染色体 / SeqID | Chr07 / NC_080393.1 |
| 坐标与链方向 | 43083464 - 43084870 / - |
| NCBI Gene ID | LOC130994249 |
|---|---|
| GeneID | 130994249 |
| locus_tag | - |
| NCBI Name | LOC130994249 |
| 原始查询 | LOC130994249 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | hit=Os12g0292200; species=rice; confidence=weak |
| 产物 | hit=Os12g0292200; species=rice; confidence=weak |
| Arabidopsis | AT2G06105 (AT2G06105)aspartyl protease gag-polyprotein [Source:NCBI gene (formerly Entrezgene);Acc:28717693] identity=39.2; qcov=0.167; evalue=1.05e-09; confidence=weak |
| Rice | Os12g0292200- identity=43.2; qcov=0.198; evalue=9.23e-16; confidence=weak |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130994249 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Cytoplasm | 细胞质 | 1.00000 | XP_057775270.1 |
| 2 | Nucleus | 细胞核 | 0.60000 | XP_057775270.1 |
| 3 | Cytosol | 细胞质基质 | 0.40000 | XP_057775270.1 |
| 4 | Chromosome | 染色体 | 0.00000 | XP_057775270.1 |
| 5 | Centromere | 着丝粒 | 0.00000 | XP_057775270.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr7:43083499 |
C |
T |
EMS_canonical_SNV | CDS_variant | 5 | A9,B1,B132,B23,B75 |
Chr7:43083529 |
C |
T |
EMS_canonical_SNV | CDS_variant | 5 | B133,B134,B16,B27,D9 |
Chr7:43083565 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B119 |
Chr7:43083611 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B119,B27,C23 |
Chr7:43083689 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B112,B128 |
Chr7:43083766 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | C38,D6 |
Chr7:43083785 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | C23,C59 |
Chr7:43083793 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B75 |
Chr7:43083795 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | A23,B139,C25,C30,C50 |
Chr7:43083803 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B55,C23,C5 |
Chr7:43083806 |
C |
T |
EMS_canonical_SNV | CDS_variant | 5 | B132,B2,B26,B65,C9 |
Chr7:43083807 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B109 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。