当前解析结果
SmilChr01G000940| 统一新 Gene ID | SmilChr01G000940 |
|---|---|
| 名称 | SmilChr01G000940 |
| 描述 | uncharacterized SmilChr01G000940 |
| 染色体 / SeqID | Chr01 / NC_080387.1 |
| 坐标与链方向 | 19900967 - 19902477 / + |
| NCBI Gene ID | LOC130994432 |
|---|---|
| GeneID | 130994432 |
| locus_tag | - |
| NCBI Name | LOC130994432 |
| 原始查询 | LOC130994432 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | hit=Os01g0595300; species=rice; confidence=low |
| 产物 | hit=Os01g0595300; species=rice; confidence=low |
| Arabidopsis | AT1G06740 (MUG3)MuDR family transposase [Source:NCBI gene (formerly Entrezgene);Acc:3766669] identity=29.2; qcov=0.616; evalue=5.62e-22; confidence=low |
| Rice | Os01g0595300- identity=30.3; qcov=0.602; evalue=1.74e-23; confidence=low |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130994432 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus | 细胞核 | 1.00000 | XP_057775479.1 |
| 2 | Cytoplasm | 细胞质 | 0.20000 | XP_057775479.1 |
| 3 | Chromosome | 染色体 | 0.00000 | XP_057775479.1 |
| 4 | Centromere | 着丝粒 | 0.00000 | XP_057775479.1 |
| 5 | Chromatin | 染色质 | 0.00000 | XP_057775479.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr1:19902198 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B16 |
Chr1:19902210 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | C46,D3 |
Chr1:19902217 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | C46,D3 |
Chr1:19902222 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B107,B16,C81 |
Chr1:19902225 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B108 |
Chr1:19902235 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | B111,B120,B39,C46,D3 |
Chr1:19902240 |
T |
TG |
1bp_insertion | frameshift_variant | 1 | B108 |
Chr1:19902240 |
T |
TG |
1bp_insertion | CDS_variant | 1 | B108 |
Chr1:19902251 |
GCC |
G |
2bp_deletion | frameshift_variant | 1 | B108 |
Chr1:19902251 |
GCC |
G |
2bp_deletion | CDS_variant | 1 | B108 |
Chr1:19902289 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B1,B108,B49 |
Chr1:19902290 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B60 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。