当前解析结果
SmilChr01G000941| 统一新 Gene ID | SmilChr01G000941 |
|---|---|
| 名称 | SmilChr01G000941 |
| 描述 | uncharacterized SmilChr01G000941 |
| 染色体 / SeqID | Chr01 / NC_080387.1 |
| 坐标与链方向 | 19907889 - 19909399 / + |
| NCBI Gene ID | LOC130994499 |
|---|---|
| GeneID | 130994499 |
| locus_tag | - |
| NCBI Name | LOC130994499 |
| 原始查询 | LOC130994499 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | hit=Os01g0595300; species=rice; confidence=low |
| 产物 | hit=Os01g0595300; species=rice; confidence=low |
| Arabidopsis | AT1G06740 (MUG3)MuDR family transposase [Source:NCBI gene (formerly Entrezgene);Acc:3766669] identity=29.2; qcov=0.616; evalue=5.62e-22; confidence=low |
| Rice | Os01g0595300- identity=30.3; qcov=0.602; evalue=1.74e-23; confidence=low |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130994499 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus | 细胞核 | 1.00000 | XP_057775546.1 |
| 2 | Cytoplasm | 细胞质 | 0.20000 | XP_057775546.1 |
| 3 | Chromosome | 染色体 | 0.00000 | XP_057775546.1 |
| 4 | Centromere | 着丝粒 | 0.00000 | XP_057775546.1 |
| 5 | Chromatin | 染色质 | 0.00000 | XP_057775546.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr1:19908843 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C40 |
Chr1:19908856 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C40 |
Chr1:19908998 |
C |
T |
EMS_canonical_SNV | stop_gained | 1 | B66 |
Chr1:19908998 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B66 |
Chr1:19909025 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B61,C58,C78 |
Chr1:19909045 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | B60,C16,C19,C72 |
Chr1:19909046 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | B60,C16,C19,C72 |
Chr1:19909055 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | B60,C16,C19,C72 |
Chr1:19909102 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | A13,A7,B131,C47,C59 |
Chr1:19909117 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B107,C25 |
Chr1:19909137 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | B133,B55,C16,D10 |
Chr1:19909150 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | D11 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。