Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr07G004040`

染色体: Chr07 坐标: 51692858-51707402 链方向: + 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr07G004040`
名称	SmilChr07G004040
描述	wall-associated receptor kinase 4-like
染色体 / SeqID	Chr07 / NC_080393.1
坐标与链方向	51692858 - 51707402 / `+`

ID 对照

NCBI Gene ID	`LOC130994723`
GeneID	`130994723`
locus_tag	`-`
NCBI Name	`LOC130994723`
原始查询	`LOC130994723`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	wall-associated receptor kinase 4-like
产物	wall-associated receptor kinase 4-like
Arabidopsis	`AT1G69730` (AT1G69730) Wall-associated kinase family protein [Source:NCBI gene (formerly Entrezgene);Acc:843309] identity=40.7; qcov=0.731; evalue=1.92e-154; confidence=medium
Rice	`Os04g0598900` (OsWAK50) - identity=42; qcov=0.703; evalue=6.79e-156; confidence=medium
GO	GO:0004674 (protein serine/threonine kinase activity); GO:0005509 (calcium ion binding); GO:0005524 (ATP binding); GO:0005886 (plasma membrane); GO:0006468 (protein phosphorylation); GO:0007166 (cell surface receptor signaling pathway); GO:0030247 (polysaccharide binding)
KEGG	-
Pfam	PF00069 (Pkinase); PF07645 (EGF_CA); PF07714 (PK_Tyr_Ser-Thr); PF12947 (EGF_3); PF13947 (GUB_WAK_bind)
InterPro	-
eggNOG	-
NR	GeneID:130994723

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Cell membrane	细胞膜	1.00000	`XP_057775773.1`
2	Nucleus	细胞核	0.00000	`XP_057775773.1`
3	Chromosome	染色体	0.00000	`XP_057775773.1`
4	Centromere	着丝粒	0.00000	`XP_057775773.1`
5	Chromatin	染色质	0.00000	`XP_057775773.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr7:51692961`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B8
`Chr7:51693026`	`G`	`A`	EMS_canonical_SNV	CDS_variant	2	C35,C7
`Chr7:51693065`	`C`	`T`	EMS_canonical_SNV	CDS_variant	3	B21,C26,C41
`Chr7:51693152`	`AC`	`A`	1bp_deletion	frameshift_variant	1	B129
`Chr7:51693152`	`AC`	`A`	1bp_deletion	CDS_variant	1	B129
`Chr7:51693181`	`G`	`A`	EMS_canonical_SNV	CDS_variant	3	B44,B72,B99
`Chr7:51693190`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	C80
`Chr7:51693293`	`G`	`A`	EMS_canonical_SNV	CDS_variant	4	B20,B68,C23,D5
`Chr7:51693524`	`G`	`A`	EMS_canonical_SNV	CDS_variant	5	B10,B114,B120,C24,C27
`Chr7:51693630`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	C54
`Chr7:51693715`	`G`	`A`	EMS_canonical_SNV	CDS_variant	5	A20,B128,B41,C54,C79
`Chr7:51693739`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B79

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057775773.1

1036 aa

518

1036

GUB_WAK_bind

EGF_CA

EGF_3

Pkinase

PK_Tyr_Ser-Thr

PF13947 GUB_WAK_bind 27-81 aa PF13947 GUB_WAK_bind 306-349 aa PF07645 EGF_CA 588-619 aa PF12947 EGF_3 594-623 aa PF00069 Pkinase 711-976 aa PF07714 PK_Tyr_Ser-Thr 714-979 aa

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057775773.1`	Pfam	`PF13947`	GUB_WAK_bind	Domain	27	81	1.2e-16	61.6	Wall-associated receptor kinase galacturonan-binding
`XP_057775773.1`	Pfam	`PF13947`	GUB_WAK_bind	Domain	306	349	1.2e-16	61.6	Wall-associated receptor kinase galacturonan-binding
`XP_057775773.1`	Pfam	`PF07645`	EGF_CA	Domain	588	619	2.9e-07	31.3	Calcium-binding EGF domain
`XP_057775773.1`	Pfam	`PF12947`	EGF_3	Domain	594	623	1.5e-08	35.4	EGF domain
`XP_057775773.1`	Pfam	`PF00069`	Pkinase	Domain	711	976	2.5e-51	175.3	Protein kinase domain
`XP_057775773.1`	Pfam	`PF07714`	PK_Tyr_Ser-Thr	Domain	714	979	1.3e-49	169.6	Protein tyrosine and serine/threonine kinase

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

1 records

下载 cDNA FASTA

XM_057919790.1
AACATGCACGCATTCAACTAAACCCATTCATTATGCGGCCTCTGCAACTAATCTCTATCTTCCTACTTTTCTCACCACTATTCTCCGCCGCTCAATTTGCCAAGCCCGGATGCCTGAATACCTGCGGGAATTTACCCATTCCATATCCATTCGGAGTCGGGTCAAATTGCTCCCTCAACCCGTATTTTAACATCGACTGCAATACTTCCACTGACCCTCCAAAAGCTTACCTCTCTTTCATCAATAAACAAGTGATTGAA...

CDS

1 records

下载 CDS FASTA

LOC130994723
ATGCGGCCTCTGCAACTAATCTCTATCTTCCTACTTTTCTCACCACTATTCTCCGCCGCTCAATTTGCCAAGCCCGGATGCCTGAATACCTGCGGGAATTTACCCATTCCATATCCATTCGGAGTCGGGTCAAATTGCTCCCTCAACCCGTATTTTAACATCGACTGCAATACTTCCACTGACCCTCCAAAAGCTTACCTCTCTTTCATCAATAAACAAGTGATTGAAATCAATCAAACTTACATTCGCCTCATAAACCC...

Protein

1 records

下载 Protein FASTA

XP_057775773.1
MRPLQLISIFLLFSPLFSAAQFAKPGCLNTCGNLPIPYPFGVGSNCSLNPYFNIDCNTSTDPPKAYLSFINKQVIEINQTYIRLINPYMISACYDLSANDGHSLSLNLSGTPYTLSFGNVLTAIGCDDMVLRSNGSSVSGGCSAFCANKNGTGGVGNCPFHGCCQERLDKGTSVMEAQLIDLSGKSQREKLFPCSYAFMQELDETTIFSYPLYYLHNSTALVNDNWASATRRPVVRLDWIVGTENCSRARNSATYACGDD...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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