Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr07G004377`

染色体: Chr07 坐标: 56310962-56315180 链方向: + 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr07G004377`
名称	SmilChr07G004377
描述	beta-fructofuranosidase, insoluble isoenzyme CWINV1-like
染色体 / SeqID	Chr07 / NC_080393.1
坐标与链方向	56310962 - 56315180 / `+`

ID 对照

NCBI Gene ID	`LOC130994860`
GeneID	`130994860`
locus_tag	`-`
NCBI Name	`LOC130994860`
原始查询	`LOC130994860`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	beta-fructofuranosidase, insoluble isoenzyme CWINV1-like
产物	beta-fructofuranosidase%2C insoluble isoenzyme CWINV1-like
Arabidopsis	`AT3G13790` (ATBFRUCT1) Glycosyl hydrolases family 32 protein [Source:NCBI gene (formerly Entrezgene);Acc:820591] identity=52.7; qcov=1.03; evalue=0; confidence=high
Rice	`Os01g0966700` (OsCIN4) - identity=48.1; qcov=1.02; evalue=8.97e-174; confidence=high
GO	GO:0004553 (hydrolase activity, hydrolyzing O-glycosyl compounds); GO:0005975 (carbohydrate metabolic process)
KEGG	-
Pfam	PF00251 (Glyco_hydro_32N); PF08244 (Glyco_hydro_32C)
InterPro	-
eggNOG	-
NR	GeneID:130994860

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Vacuole	液泡	0.60000	`XP_057775950.1`
2	Endoplasmic reticulum	内质网	0.40000	`XP_057775950.1`
3	Cytosol	细胞质基质	0.20000	`XP_057775950.1`
4	Nucleus	细胞核	0.00000	`XP_057775950.1`
5	Chromosome	染色体	0.00000	`XP_057775950.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr7:56312621`	`G`	`A`	EMS_canonical_SNV	CDS_variant	5	B115,B133,B16,C50,D4
`Chr7:56312651`	`G`	`A`	EMS_canonical_SNV	CDS_variant	4	B133,B16,C50,D4
`Chr7:56312670`	`GC`	`G`	1bp_deletion	frameshift_variant	4	A22,A7,B30,B47
`Chr7:56312670`	`GC`	`G`	1bp_deletion	CDS_variant	4	A22,A7,B30,B47
`Chr7:56312672`	`G`	`A`	EMS_canonical_SNV	CDS_variant	4	B131,C50,C72,D4
`Chr7:56312694`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	C5
`Chr7:56312712`	`G`	`A`	EMS_canonical_SNV	CDS_variant	5	A21,B101,C45,C58,C71
`Chr7:56312741`	`C`	`T`	EMS_canonical_SNV	CDS_variant	3	A20,B105,B40
`Chr7:56312759`	`G`	`A`	EMS_canonical_SNV	stop_gained	61	A13,A15,A16,A25,A4,A6,A9,B108,B112,B113,B120,B122,B127,B130,B132,B134,B14,B140,B19,B24,B27,B32,B38,B39,B41,B45,B46,B50,B51,B52,B54,B58,B59,B73,B77,B83,B84,B9,B96,C16,C21,C22,C26,C3,C33,C4,C42,C43,C46,C47,C49,C59,C6,C63,C64,C65,C66,C70,C74,C81,D11
`Chr7:56312787`	`GA`	`G`	1bp_deletion	frameshift_variant	1	D1
`Chr7:56312787`	`GA`	`G`	1bp_deletion	CDS_variant	1	D1
`Chr7:56312797`	`C`	`T`	EMS_canonical_SNV	CDS_variant	4	B13,B22,C72,C9

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057775950.1

502 aa

251

502

Glyco_hydro_32N

Glyco_hydro_32C

PF00251 Glyco_hydro_32N 1-289 aa PF08244 Glyco_hydro_32C 292-484 aa

XP_057775951.1

502 aa

251

502

Glyco_hydro_32N

Glyco_hydro_32C

PF00251 Glyco_hydro_32N 1-289 aa PF08244 Glyco_hydro_32C 292-484 aa

XP_057775952.1

502 aa

251

502

Glyco_hydro_32N

Glyco_hydro_32C

PF00251 Glyco_hydro_32N 1-289 aa PF08244 Glyco_hydro_32C 292-484 aa

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057775950.1`	Pfam	`PF00251`	Glyco_hydro_32N	Repeat	1	289	9.2e-83	279.0	Glycosyl hydrolases family 32 N-terminal domain
`XP_057775950.1`	Pfam	`PF08244`	Glyco_hydro_32C	Domain	292	484	2e-23	83.9	Glycosyl hydrolases family 32 C terminal
`XP_057775951.1`	Pfam	`PF00251`	Glyco_hydro_32N	Repeat	1	289	9.2e-83	279.0	Glycosyl hydrolases family 32 N-terminal domain
`XP_057775951.1`	Pfam	`PF08244`	Glyco_hydro_32C	Domain	292	484	2e-23	83.9	Glycosyl hydrolases family 32 C terminal
`XP_057775952.1`	Pfam	`PF00251`	Glyco_hydro_32N	Repeat	1	289	9.2e-83	279.0	Glycosyl hydrolases family 32 N-terminal domain
`XP_057775952.1`	Pfam	`PF08244`	Glyco_hydro_32C	Domain	292	484	2e-23	83.9	Glycosyl hydrolases family 32 C terminal

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

3 records

下载 cDNA FASTA

XM_057919967.1
GATTCATCTCGATCGATGACAACAATAGTAAATATATTACTGCAAGTTGGACTTTACATATGCACACAAAAATGCTACAAATCAACTATACCACTTACTGTTTCAACTGATTATTCCGAAATAATCTGTATATATCGATCCAATTTTTCTGGGAAAAAGAAAGCATGGAGAAATCTGCGATAAAGTTTCTGGTTTTACAGCTTATTTTGATTTGTTTTGGAGTTGGAGTTAGAGGCGTTGACCAAGAAGAAAAAATTCTT...

XM_057919968.1
GATTCATCTCGATCGATGACAACAATAGTAAATATATTACTGCAAGTTGGACTTTACATATGCACACAAAAATGCTACAAATCAACTATACCACTTACTGTTTCAACTGATTATTCCGAAATAATCTGTATATATCGATCCAATTTTTCTGGGAAAAAGAAAGCATGGAGAAATCTGCGATAAAGTTTCTGGTTTTACAGCTTATTTTGATTTGTTTTGGAGTTGGAGTTAGAGGCGTTGACCAAGAAGAAAAAATTCTT...

CDS

3 records

下载 CDS FASTA

LOC130994860
ATGTACTACAATGGAGTCTACCACTTGTTCTATCAGTACAACCCATATGCTGCCGTGTGGGGAAACATTTCATGGGCGCATTCGGTTTCTTACAACCTCGTTGACTGGATCCATCTCGAGCCCGCCCTCAATCCAACTGAGAACTACGACGTCAATGGCTGCTGGTCTGGCTCAGCCACACTTCTTGCAGGGGAAGGGAAGCCTCTCATTCTCTACACGGGCTCCGACTTTCTAGGCCATCAAGTTCAAAACCTTGCAAT...

Protein

3 records

下载 Protein FASTA

XP_057775950.1
MYYNGVYHLFYQYNPYAAVWGNISWAHSVSYNLVDWIHLEPALNPTENYDVNGCWSGSATLLAGEGKPLILYTGSDFLGHQVQNLAMPKDLSDPFLTEWVKSPHNPLMLPVEGINPGFFRDPTTAWQGPDGSWRVLVGSQVEGHGAALLYKSRDFVSWERAARPLHESSRTGMWECPDFYGVDDFIHVLKASFNDHDYYVVGRYDAGTDEFGVVGSDFMDDVVRLRYDYGVFYASKTFHDDAKKRRVVWGWVTEGDGDDG...

XP_057775951.1
MYYNGVYHLFYQYNPYAAVWGNISWAHSVSYNLVDWIHLEPALNPTENYDVNGCWSGSATLLAGEGKPLILYTGSDFLGHQVQNLAMPKDLSDPFLTEWVKSPHNPLMLPVEGINPGFFRDPTTAWQGPDGSWRVLVGSQVEGHGAALLYKSRDFVSWERAARPLHESSRTGMWECPDFYGVDDFIHVLKASFNDHDYYVVGRYDAGTDEFGVVGSDFMDDVVRLRYDYGVFYASKTFHDDAKKRRVVWGWVTEGDGDDG...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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