当前解析结果
SmilChr07G004288| 统一新 Gene ID | SmilChr07G004288 |
|---|---|
| 名称 | SmilChr07G004288 |
| 描述 | uncharacterized SmilChr07G004288 |
| 染色体 / SeqID | Chr07 / NC_080393.1 |
| 坐标与链方向 | 55447191 - 55450863 / - |
| NCBI Gene ID | LOC130994905 |
|---|---|
| GeneID | 130994905 |
| locus_tag | - |
| NCBI Name | LOC130994905 |
| 原始查询 | LOC130994905 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | intracellular protein transporter [Source:NCBI gene (formerly Entrezgene);Acc:828873]; symbol=AT4G27620; hit=AT4G27620; species=arabidopsis; confidence=high |
| 产物 | intracellular protein transporter [Source:NCBI gene (formerly Entrezgene);Acc:828873]; symbol=AT4G27620; hit=AT4G27620; species=arabidopsis; confidence=high |
| Arabidopsis | AT4G27620 (AT4G27620)intracellular protein transporter [Source:NCBI gene (formerly Entrezgene);Acc:828873] identity=60.66; qcov=0.935; evalue=3.26e-132; confidence=high |
| Rice | Os02g0582200- identity=54.47; qcov=0.952; evalue=1.11e-114; confidence=high |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130994905 |
| Rank | 定位位置 | 中文 | 五折投票比例 | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus membrane | 核膜 | 0.60000 | XP_057776018.1 |
| 2 | Nucleus | 细胞核 | 0.20000 | XP_057776018.1 |
| 3 | Endoplasmic reticulum | 内质网 | 0.20000 | XP_057776018.1 |
| 4 | Endoplasmic reticulum membrane | 内质网膜 | 0.20000 | XP_057776018.1 |
| 5 | Peroxisome | 过氧化物酶体 | 0.20000 | XP_057776020.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr7:55447563 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B122,B31 |
Chr7:55447701 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B12,B55 |
Chr7:55447704 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C5 |
Chr7:55447734 |
GT |
G |
1bp_deletion | frameshift_variant | 2 | C21,D1 |
Chr7:55447734 |
GT |
G |
1bp_deletion | CDS_variant | 2 | C21,D1 |
Chr7:55447797 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | B20,B53,B60,B78,C59 |
Chr7:55447992 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | B40,B94,C21,C62 |
Chr7:55448010 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B124,B71 |
Chr7:55448130 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B104,C13 |
Chr7:55448790 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | B40,B94,C21,C62,D1 |
Chr7:55448805 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | C43,C65 |
Chr7:55448913 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | A11,B16,B89,C34 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
4 records
下载 cDNA FASTA4 records
下载 CDS FASTA4 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。