Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr07G004440`

染色体: Chr07 坐标: 57052654-57059704 链方向: - 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr07G004440`
名称	SmilChr07G004440
描述	uncharacterized SmilChr07G004440
染色体 / SeqID	Chr07 / NC_080393.1
坐标与链方向	57052654 - 57059704 / `-`

ID 对照

NCBI Gene ID	`LOC130995056`
GeneID	`130995056`
locus_tag	`-`
NCBI Name	`LOC130995056`
原始查询	`LOC130995056`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein [Source:NCBI gene (formerly Entrezgene);Acc:829445]; symbol=AT4G33080; hit=AT4G33080; species=arabidopsis; confidence=high
产物	AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein [Source:NCBI gene (formerly Entrezgene);Acc:829445]; symbol=AT4G33080; hit=AT4G33080; species=arabidopsis; confidence=high
Arabidopsis	`AT4G33080` (AT4G33080) AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein [Source:NCBI gene (formerly Entrezgene);Acc:829445] identity=77.9; qcov=0.998; evalue=0; confidence=high
Rice	`Os01g0186700` - identity=80.9; qcov=0.873; evalue=0; confidence=high
GO	GO:0004674 (protein serine/threonine kinase activity); GO:0005524 (ATP binding); GO:0018105 (peptidyl-serine phosphorylation); GO:0035556 (intracellular signal transduction)
KEGG	-
Pfam	PF00069 (Pkinase); PF00433 (Pkinase_C); PF03109 (ABC1); PF07714 (PK_Tyr_Ser-Thr)
InterPro	-
eggNOG	-
NR	GeneID:130995056

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Nucleus	细胞核	1.00000	`XP_057776188.1`
2	Cytoplasm	细胞质	1.00000	`XP_057776188.1`
3	Cytosol	细胞质基质	0.80000	`XP_057776188.1`
4	Chromosome	染色体	0.00000	`XP_057776188.1`
5	Centromere	着丝粒	0.00000	`XP_057776188.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr7:57053051`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	C44
`Chr7:57053113`	`G`	`A`	EMS_canonical_SNV	CDS_variant	4	B138,B22,C37,C75
`Chr7:57053114`	`C`	`T`	EMS_canonical_SNV	CDS_variant	5	B88,B89,C17,C60,C84
`Chr7:57053154`	`G`	`A`	EMS_canonical_SNV	CDS_variant	5	A7,B102,B133,B17,C44
`Chr7:57053174`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	C11
`Chr7:57053879`	`GC`	`G`	1bp_deletion	frameshift_variant	1	C14
`Chr7:57053879`	`GC`	`G`	1bp_deletion	CDS_variant	1	C14
`Chr7:57053914`	`GC`	`G`	1bp_deletion	frameshift_variant	1	B110
`Chr7:57053914`	`GC`	`G`	1bp_deletion	CDS_variant	1	B110
`Chr7:57054572`	`G`	`A`	EMS_canonical_SNV	CDS_variant	4	B21,B46,C46,D7
`Chr7:57054593`	`G`	`A`	EMS_canonical_SNV	CDS_variant	4	B21,B46,C46,D7
`Chr7:57054605`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	C44

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057776188.1

550 aa

275

550

Pkinase

PK_Tyr_Ser-Thr

ABC1

Pkinase

Pkinase_C

PF00069 Pkinase 95-244 aa PF07714 PK_Tyr_Ser-Thr 96-251 aa PF03109 ABC1 168-246 aa PF00069 Pkinase 292-401 aa PF00433 Pkinase_C 420-465 aa

XP_057776189.1

521 aa

260

521

Pkinase

PK_Tyr_Ser-Thr

ABC1

Pkinase

Pkinase_C

PF00069 Pkinase 95-244 aa PF07714 PK_Tyr_Ser-Thr 96-251 aa PF03109 ABC1 168-246 aa PF00069 Pkinase 292-401 aa PF00433 Pkinase_C 420-465 aa

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057776188.1`	Pfam	`PF00069`	Pkinase	Domain	95	244	9.9e-69	232.4	Protein kinase domain
`XP_057776188.1`	Pfam	`PF07714`	PK_Tyr_Ser-Thr	Domain	96	251	3e-30	106.1	Protein tyrosine and serine/threonine kinase
`XP_057776188.1`	Pfam	`PF03109`	ABC1	Domain	168	246	5.1e-07	29.8	ABC1 atypical kinase-like domain
`XP_057776188.1`	Pfam	`PF00069`	Pkinase	Domain	292	401	9.9e-69	232.4	Protein kinase domain
`XP_057776188.1`	Pfam	`PF00433`	Pkinase_C	Family	420	465	3.9e-06	28.2	Protein kinase C terminal domain
`XP_057776189.1`	Pfam	`PF00069`	Pkinase	Domain	95	244	8e-69	232.7	Protein kinase domain
`XP_057776189.1`	Pfam	`PF07714`	PK_Tyr_Ser-Thr	Domain	96	251	2.5e-30	106.4	Protein tyrosine and serine/threonine kinase
`XP_057776189.1`	Pfam	`PF03109`	ABC1	Domain	168	246	4.6e-07	29.9	ABC1 atypical kinase-like domain
`XP_057776189.1`	Pfam	`PF00069`	Pkinase	Domain	292	401	8e-69	232.7	Protein kinase domain
`XP_057776189.1`	Pfam	`PF00433`	Pkinase_C	Family	420	465	3.1e-06	28.5	Protein kinase C terminal domain

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

3 records

下载 cDNA FASTA

XR_009092033.1
ACACCCTCTCTCGTCTTTCTCTCCTGTCACAGTCTCACTAACCCCGCAAACCCCCCCCCCCCCCCCCCCCCCCCCCCGTTCTCTTCTCCCCCACTGAAACCCCCCCAACTCCCCGCCGCTCCTCGATCTGAATAATCGCGGCGAAGTGTCGACGCTTCACCGCAACGCTCTCTTCTTTCTCCCCCACTTGGCGCTTTCTTTCCTCTCCAACACAGTTAGTATACTGCATATGCCTATACTATCTAGGTCTCATATGCTCT...

XM_057920206.1
CCGTACGGTCAAATAGAAACACAGTCACACTCACACACCCTCTCTCGTCTTTCTCTCCTGTCACAGTCTCACTAACCCCGCAAACCCCCCCCCCCCCCCCCCCCCCCCCCCGTTCTCTTCTCCCCCACTGAAACCCCCCCAACTCCCCGCCGCTCCTCGATCTGAATAATCGCGGCGAAGTGTCGACGCTTCACCGCAACGCTCTCTTCTTTCTCCCCCACTTGGCGCTTTCTTTCCTCTCCAACACAGTTAGTATACTG...

CDS

2 records

下载 CDS FASTA

LOC130995056
ATGGAGGAGGAGAAGAGCAACGACAACATCGGCGAAGAAGAAATTCTAGGTTCGAGTTTGACTATGGAGAAAGTGGCAGCAGCTAAAAAGTACATCGAGAATCACTACAAAAATCAGATGAAAAGCATACAGGAGCGGAAAGAGAGGAGGTGGATACTAGAAAGGAAGTTGGCCTCTTCAGATGTGCCCAAAGAGGAACGAATAAATTTGATCAAAGATTTGGAAAGGAAAGAGACTGAGTTCATGAGATTGAGAAGGAA...

Protein

2 records

下载 Protein FASTA

XP_057776188.1
MEEEKSNDNIGEEEILGSSLTMEKVAAAKKYIENHYKNQMKSIQERKERRWILERKLASSDVPKEERINLIKDLERKETEFMRLRRNKICVDDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVSRGQVEHVRAERNLLAEVGSHCIVKLYYSFQDPEYLYLIMEYLPGGDMMTLLMREDTLSENVAKFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCRTLSTVNENEELDDEN...

XP_057776189.1
MEEEKSNDNIGEEEILGSSLTMEKVAAAKKYIENHYKNQMKSIQERKERRWILERKLASSDVPKEERINLIKDLERKETEFMRLRRNKICVDDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVSRGQVEHVRAERNLLAEVGSHCIVKLYYSFQDPEYLYLIMEYLPGGDMMTLLMREDTLSENVAKFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCRTLSTVNENEELDDEN...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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