Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr07G004663`

染色体: Chr07 坐标: 59531428-59534312 链方向: - 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr07G004663`
名称	SmilChr07G004663
描述	uncharacterized SmilChr07G004663
染色体 / SeqID	Chr07 / NC_080393.1
坐标与链方向	59531428 - 59534312 / `-`

ID 对照

NCBI Gene ID	`LOC130995234`
GeneID	`130995234`
locus_tag	`-`
NCBI Name	`LOC130995234`
原始查询	`LOC130995234`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; Arabidopsis/Rice homolog
描述	tail fiber [Source:NCBI gene (formerly Entrezgene);Acc:830998]; symbol=AT5G11280; hit=AT5G11280; species=arabidopsis; confidence=high
产物	tail fiber [Source:NCBI gene (formerly Entrezgene);Acc:830998]; symbol=AT5G11280; hit=AT5G11280; species=arabidopsis; confidence=high
Arabidopsis	`AT5G11280` (AT5G11280) tail fiber [Source:NCBI gene (formerly Entrezgene);Acc:830998] identity=68.7; qcov=0.948; evalue=2.04e-102; confidence=high
Rice	`Os01g0555300` - identity=58.6; qcov=0.981; evalue=4.3e-90; confidence=high
GO	-
KEGG	-
Pfam	-
InterPro	-
eggNOG	-
NR	GeneID:130995234

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Endoplasmic reticulum	内质网	0.80000	`XP_057776419.1`
2	Endoplasmic reticulum membrane	内质网膜	0.60000	`XP_057776418.1`
3	Mitochondrion	线粒体	0.40000	`XP_057776418.1`
4	Mitochondrion membrane	线粒体膜	0.40000	`XP_057776418.1`
5	Nucleus	细胞核	0.00000	`XP_057776418.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr7:59531670`	`G`	`A`	EMS_canonical_SNV	CDS_variant	4	B129,B18,B87,C5
`Chr7:59531682`	`G`	`A`	EMS_canonical_SNV	CDS_variant	3	A5,B70,C49
`Chr7:59531684`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B137
`Chr7:59531790`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B137
`Chr7:59531839`	`C`	`CG`	1bp_insertion	frameshift_variant	4	C53,C55,C71,C78
`Chr7:59531839`	`C`	`CG`	1bp_insertion	CDS_variant	4	C53,C55,C71,C78
`Chr7:59531840`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B99
`Chr7:59531867`	`C`	`T`	EMS_canonical_SNV	CDS_variant	4	B138,B3,B81,B87
`Chr7:59532229`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B26
`Chr7:59533883`	`G`	`A`	EMS_canonical_SNV	CDS_variant	5	B2,B59,B82,B86,D11
`Chr7:59533900`	`ACT`	`A`	2bp_deletion	frameshift_variant	5	B2,B59,B82,B86,D11
`Chr7:59533900`	`ACT`	`A`	2bp_deletion	CDS_variant	5	B2,B59,B82,B86,D11

进入 EMS 突变库

预测功能结构域

当前发布数据中，此基因没有可展示的 Pfam 结构域命中。

进入结构域查询

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

2 records

下载 cDNA FASTA

XM_057920435.1
CCTATAAAATCAAAAACACATCCAATAAGTTGAGATATAAAATAAAATTGAAAGCTAAAACACTTACAAGAAAAAAAGTTAGATGTTCTCTCATCTCCTACTTCAGTTCTAGCGGAAGAATGAGAATCGAAAAGAGTCCTAATCGAAGAAGCTCCATCACGCGATCTACTATGGCGAATGCATCTGCGCCTGCGGCGAAGGGGAAGTGGAGCAACCTCCCCAAATATGCTTCTTTCACATATTTCGTTCTCATCATTTTT...

XM_057920436.1
AATTTAAAATTTGTAAGCACCACCGTTTCTGCTTCACTCGATTTGACGAGGAAAAAAACAAAACAAAACGAAATGCATCACTTGGAAAGAAATCGCGTTCATGATTGAGCACGACTCCAAGTCCTAATCGAAGAAGCTCCATCACGCGATCTACTATGGCGAATGCATCTGCGCCTGCGGCGAAGGGGAAGTGGAGCAACCTCCCCAAATATGCTTCTTTCACATATTTCGTTCTCATCATTTTTCAGGTGCCCCTTTTC...

CDS

2 records

下载 CDS FASTA

LOC130995234
ATGAGAATCGAAAAGAGTCCTAATCGAAGAAGCTCCATCACGCGATCTACTATGGCGAATGCATCTGCGCCTGCGGCGAAGGGGAAGTGGAGCAACCTCCCCAAATATGCTTCTTTCACATATTTCGTTCTCATCATTTTTCAGGTGCCCCTTTTCAGGATCCAATGTCGATCGGGCATGTGCACGACACCTATTCACGTGACAGCCTCACAGCTGATTTCGAGTGAGATTTTCCCACTTCCAGTGGTGAAGACTCTTCT...

LOC130995234
ATGGCGAATGCATCTGCGCCTGCGGCGAAGGGGAAGTGGAGCAACCTCCCCAAATATGCTTCTTTCACATATTTCGTTCTCATCATTTTTCAGGTGCCCCTTTTCAGGATCCAATGTCGATCGGGCATGTGCACGACACCTATTCACGTGACAGCCTCACAGCTGATTTCGAGTGAGATTTTCCCACTTCCAGTGGTGAAGACTCTTCTCTACCCCGGAGCTATTGTGAACGGCCTCGCTACCAACATGAGTTTCCCGAG...

Protein

2 records

下载 Protein FASTA

XP_057776418.1
MRIEKSPNRRSSITRSTMANASAPAAKGKWSNLPKYASFTYFVLIIFQVPLFRIQCRSGMCTTPIHVTASQLISSEIFPLPVVKTLLYPGAIVNGLATNMSFPSWNNLLSIYNLTNIKEASPEVDLQRLEVLAGSYFCVAGSLVGLLKQGRMNMFGTLLVIWGLLKEGILGKPANTDPQKAVFVYPTMMIAVLCAFLSVKYNLKKIAQKNTATQPAAKPLKSSSKAKLK

XP_057776419.1
MANASAPAAKGKWSNLPKYASFTYFVLIIFQVPLFRIQCRSGMCTTPIHVTASQLISSEIFPLPVVKTLLYPGAIVNGLATNMSFPSWNNLLSIYNLTNIKEASPEVDLQRLEVLAGSYFCVAGSLVGLLKQGRMNMFGTLLVIWGLLKEGILGKPANTDPQKAVFVYPTMMIAVLCAFLSVKYNLKKIAQKNTATQPAAKPLKSSSKAKLK

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

下载 upstream 下载 downstream 下载 upstream + gene + downstream

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