Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr07G004715`

染色体: Chr07 坐标: 59999652-60002720 链方向: + 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr07G004715`
名称	SmilChr07G004715
描述	uncharacterized vacuolar membrane protein YML018C-like
染色体 / SeqID	Chr07 / NC_080393.1
坐标与链方向	59999652 - 60002720 / `+`

ID 对照

NCBI Gene ID	`LOC130995282`
GeneID	`130995282`
locus_tag	`-`
NCBI Name	`LOC130995282`
原始查询	`LOC130995282`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; NCBI GO GAF; Arabidopsis/Rice homolog
描述	EamA-like transporter family [Source:NCBI gene (formerly Entrezgene);Acc:829346]; symbol=AT4G32140; hit=AT4G32140; species=arabidopsis; confidence=high
产物	EamA-like transporter family [Source:NCBI gene (formerly Entrezgene);Acc:829346]; symbol=AT4G32140; hit=AT4G32140; species=arabidopsis; confidence=high
Arabidopsis	`AT4G32140` (AT4G32140) EamA-like transporter family [Source:NCBI gene (formerly Entrezgene);Acc:829346] identity=61.6; qcov=1.07; evalue=9.06e-135; confidence=high
Rice	`Os04g0645600` - identity=57; qcov=1.07; evalue=6.8e-129; confidence=high
GO	GO:0090087 (regulation of peptide transport)
KEGG	-
Pfam	-
InterPro	-
eggNOG	-
NR	GeneID:130995282

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Vacuole	液泡	1.00000	`XP_057776499.1`
2	Vacuole membrane	液泡膜	1.00000	`XP_057776499.1`
3	Nucleus	细胞核	0.00000	`XP_057776499.1`
4	Chromosome	染色体	0.00000	`XP_057776499.1`
5	Centromere	着丝粒	0.00000	`XP_057776499.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr7:59999994`	`G`	`A`	EMS_canonical_SNV	CDS_variant	2	C23,C79
`Chr7:60000776`	`CAG`	`C`	2bp_deletion	frameshift_variant	1	B122
`Chr7:60000776`	`CAG`	`C`	2bp_deletion	CDS_variant	1	B122
`Chr7:60000782`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B21
`Chr7:60000927`	`C`	`T`	EMS_canonical_SNV	stop_gained	26	B120,B17,B25,B27,B30,B34,B35,B37,B40,B47,B68,B73,B8,B82,B94,B99,C11,C16,C25,C35,C36,C4,C48,C6,C63,C69
`Chr7:60001025`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	B68,B83
`Chr7:60001255`	`C`	`T`	EMS_canonical_SNV	CDS_variant	3	B16,B18,B36
`Chr7:60001285`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	D10
`Chr7:60001336`	`T`	`TG`	1bp_insertion	frameshift_variant	3	B49,B80,C41
`Chr7:60001336`	`T`	`TG`	1bp_insertion	CDS_variant	3	B49,B80,C41
`Chr7:60001373`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	C29
`Chr7:60001483`	`G`	`A`	EMS_canonical_SNV	CDS_variant	2	B20,B55

进入 EMS 突变库

预测功能结构域

当前发布数据中，此基因没有可展示的 Pfam 结构域命中。

进入结构域查询

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

2 records

下载 cDNA FASTA

XM_057920516.1
CAATCTGGCTTCTGAGATGCAAATTTTTAGGCGACAAGAAACACAATCCAAATTCAATTATCTTCAATCAATCTCATCTAAAAATGATCAATTTGGGAGTATAGATTATTCCTACTAGACAAACAAATCTTAAAGTATACGTTGATTTACATTCTCCTCAAACCCAACAAATCCCTACACATTTTGGATTTTATGATTTTTTCTCCGGCTTCATCAACCCCAATATTGAAAAACATATTCTTTTTTTCACAATTTGTGTT...

XM_057920518.1
CTGGCTTCTGAGATGCAAATTTTTAGGCGACAAGAAACACAATCCAAATTCAATTATCTTCAATCAATCTCATCTAAAAATGATCAATTTGGGAGTATAGATTATTCCTACTAGACAAACAAATCTTAAAGTATACGTTGATTTACATTCTCCTCAAACCCAACAAATCCCTACACATTTTGGATTTTATGATTTTTTCTCCGGCTTCATCAACCCCAATATTGAAAAACATATTCTTTTTTTCACAATTTGTGTTAAAG...

CDS

2 records

下载 CDS FASTA

LOC130995282
ATGGGCTGGAGATACAAGGGTGGTCTGATGTTGATTGGTGTGGTGGTCTTCATTTGGGTTTCCTCTGCGGAGGTCACTCAGCGTATTTTCAGAGTGTATGAGCAACCATTTGCAGTGACATATCTAGGAGCTTCTTTAATGGTGATTTACTTGCCTATATCATTTCTCAAAGAGTGGATGTGTAACTGTGTGAAGAGACGCTCACCCGAATCTCCTCTGAAGTACATTGGAGGGTCGAATCGAGAATCTTTCAGCAGAAA...

LOC130995282
ATGGTGATTTACTTGCCTATATCATTTCTCAAAGAGTGGATGTGTAACTGTGTGAAGAGACGCTCACCCGAATCTCCTCTGAAGTACATTGGAGGGTCGAATCGAGAATCTTTCAGCAGAAAAGACAGCGACTTAGACCTCTCTCAACACGAGGAAGGAATAGCTTTGGTTTCTGAACATGGAGATGCTGCTAGAGTGATCAGATATAAAAATGAGTTTGCAATGAAACATATTGCTATATATGGATTCTACATGGCACC...

Protein

2 records

下载 Protein FASTA

XP_057776499.1
MGWRYKGGLMLIGVVVFIWVSSAEVTQRIFRVYEQPFAVTYLGASLMVIYLPISFLKEWMCNCVKRRSPESPLKYIGGSNRESFSRKDSDLDLSQHEEGIALVSEHGDAARVIRYKNEFAMKHIAIYGFYMAPLWFITEYLSNAALLRTSVASTTVLSSTSGLFTLMIGAFLGEDSINVAKVVSVLVSILGVVMTTLGGTWASDDDLQLDSSSRGTLVGDLLGLLSAVTYGLFTVLLKKISGHEERRVQKLFGYIGLSTL...

XP_057776501.1
MVIYLPISFLKEWMCNCVKRRSPESPLKYIGGSNRESFSRKDSDLDLSQHEEGIALVSEHGDAARVIRYKNEFAMKHIAIYGFYMAPLWFITEYLSNAALLRTSVASTTVLSSTSGLFTLMIGAFLGEDSINVAKVVSVLVSILGVVMTTLGGTWASDDDLQLDSSSRGTLVGDLLGLLSAVTYGLFTVLLKKISGHEERRVQKLFGYIGLSTLVSLWWLVWPLRALGVEPESTFPTSAKVAKLVVANGLIGSVLSDYCW...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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