当前解析结果
SmilChr07G004731| 统一新 Gene ID | SmilChr07G004731 |
|---|---|
| 名称 | SmilChr07G004731 |
| 描述 | probable anion transporter 5 |
| 染色体 / SeqID | Chr07 / NC_080393.1 |
| 坐标与链方向 | 60188805 - 60191488 / + |
| NCBI Gene ID | LOC130995294 |
|---|---|
| GeneID | 130995294 |
| locus_tag | - |
| NCBI Name | LOC130995294 |
| 原始查询 | LOC130995294 |
| 来源 | GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog |
|---|---|
| 描述 | probable anion transporter 5 |
| 产物 | probable anion transporter 5 |
| Arabidopsis | AT5G44370 (PHT4;6)phosphate transporter 4;6 [Source:NCBI gene (formerly Entrezgene);Acc:834463] identity=75; qcov=1; evalue=0; confidence=high |
| Rice | Os12g0180100 (OsPT26)probable anion transporter 7 [Source:NCBI gene (formerly Entrezgene);Acc:4351670] identity=73.1; qcov=0.989; evalue=0; confidence=high |
| GO | GO:0022857 (transmembrane transporter activity); GO:0055085 (transmembrane transport) |
| KEGG | - |
| Pfam | PF00083 (Sugar_tr); PF07690 (MFS_1) |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130995294 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Vacuole | 液泡 | 0.60000 | XP_057776513.1 |
| 2 | Vacuole membrane | 液泡膜 | 0.60000 | XP_057776513.1 |
| 3 | Cytoplasmic vesicle | 细胞质囊泡 | 0.40000 | XP_057776513.1 |
| 4 | Secretory vesicle | Secretory vesicle | 0.40000 | XP_057776513.1 |
| 5 | Nucleus | 细胞核 | 0.00000 | XP_057776513.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr7:60189985 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | A18,C82 |
Chr7:60190047 |
C |
T |
EMS_canonical_SNV | CDS_variant | 5 | A13,A24,B34,B9,C42 |
Chr7:60190156 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | B103,B111,B126,B76 |
Chr7:60190264 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B101 |
Chr7:60190546 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B101 |
Chr7:60190960 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B104,B140 |
Chr7:60191011 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B111 |
Chr7:60191062 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B111 |
Chr7:60191203 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C70 |
结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。
XP_057776513.1PF07690
MFS_1 17-391 aa
PF00083
Sugar_tr 39-182 aa
XP_057776514.1PF07690
MFS_1 17-391 aa
PF00083
Sugar_tr 39-182 aa
XP_057776515.1PF07690
MFS_1 17-391 aa
PF00083
Sugar_tr 39-182 aa
XP_057776516.1PF07690
MFS_1 17-391 aa
PF00083
Sugar_tr 39-182 aa
| Protein ID | 来源 | 结构域编号 | 结构域名称 | 类型 | 起始 aa | 终止 aa | E-value | Score | 说明 |
|---|---|---|---|---|---|---|---|---|---|
XP_057776513.1 |
Pfam | PF07690 |
MFS_1 | Family | 17 | 391 | 5.3e-51 | 174.3 | Major Facilitator Superfamily |
XP_057776513.1 |
Pfam | PF00083 |
Sugar_tr | Family | 39 | 182 | 2.2e-05 | 24.3 | Sugar (and other) transporter |
XP_057776514.1 |
Pfam | PF07690 |
MFS_1 | Family | 17 | 391 | 5.3e-51 | 174.3 | Major Facilitator Superfamily |
XP_057776514.1 |
Pfam | PF00083 |
Sugar_tr | Family | 39 | 182 | 2.2e-05 | 24.3 | Sugar (and other) transporter |
XP_057776515.1 |
Pfam | PF07690 |
MFS_1 | Family | 17 | 391 | 5.3e-51 | 174.3 | Major Facilitator Superfamily |
XP_057776515.1 |
Pfam | PF00083 |
Sugar_tr | Family | 39 | 182 | 2.2e-05 | 24.3 | Sugar (and other) transporter |
XP_057776516.1 |
Pfam | PF07690 |
MFS_1 | Family | 17 | 391 | 5.3e-51 | 174.3 | Major Facilitator Superfamily |
XP_057776516.1 |
Pfam | PF00083 |
Sugar_tr | Family | 39 | 182 | 2.2e-05 | 24.3 | Sugar (and other) transporter |
每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
4 records
下载 cDNA FASTA4 records
下载 CDS FASTA4 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。