Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr07G001664`

染色体: Chr07 坐标: 14092769-14101223 链方向: + 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr07G001664`
名称	SmilChr07G001664
描述	uncharacterized SmilChr07G001664
染色体 / SeqID	Chr07 / NC_080393.1
坐标与链方向	14092769 - 14101223 / `+`

ID 对照

NCBI Gene ID	`LOC130995363`
GeneID	`130995363`
locus_tag	`-`
NCBI Name	`LOC130995363`
原始查询	`LOC130995363`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	AAA-type ATPase family protein [Source:NCBI gene (formerly Entrezgene);Acc:827979]; symbol=AT4G02480; hit=AT4G02480; species=arabidopsis; confidence=high
产物	AAA-type ATPase family protein [Source:NCBI gene (formerly Entrezgene);Acc:827979]; symbol=AT4G02480; hit=AT4G02480; species=arabidopsis; confidence=high
Arabidopsis	`AT4G02480` (AT4G02480) AAA-type ATPase family protein [Source:NCBI gene (formerly Entrezgene);Acc:827979] identity=62.6; qcov=0.999; evalue=0; confidence=high
Rice	`Os03g0344700` - identity=56.1; qcov=0.732; evalue=0; confidence=high
GO	GO:0005515 (protein binding); GO:0005524 (ATP binding); GO:0005741 (mitochondrial outer membrane); GO:0016887 (ATP hydrolysis activity)
KEGG	-
Pfam	PF00004 (AAA); PF07728 (AAA_5); PF17862 (AAA_lid_3); PF24933 (DUF7751)
InterPro	-
eggNOG	-
NR	GeneID:130995363

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Nucleus	细胞核	1.00000	`XP_057776604.1`
2	Cytosol	细胞质基质	1.00000	`XP_057776605.1`
3	Cytoplasm	细胞质	0.60000	`XP_057776605.1`
4	Chromosome	染色体	0.00000	`XP_057776604.1`
5	Centromere	着丝粒	0.00000	`XP_057776604.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr7:14098420`	`G`	`A`	EMS_canonical_SNV	CDS_variant	2	B111,C5
`Chr7:14099791`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	C1
`Chr7:14100305`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	D11
`Chr7:14100326`	`C`	`T`	EMS_canonical_SNV	CDS_variant	3	B129,C33,C46

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057776604.1

1230 aa

615

1230

DUF7751

AAA_5

AAA

AAA_lid_3

PF24933 DUF7751 827-887 aa PF07728 AAA_5 966-1088 aa PF00004 AAA 966-1096 aa PF17862 AAA_lid_3 1119-1155 aa

XP_057776605.1

1122 aa

561

1122

DUF7751

AAA_5

AAA

AAA_lid_3

PF24933 DUF7751 719-779 aa PF07728 AAA_5 858-980 aa PF00004 AAA 858-988 aa PF17862 AAA_lid_3 1011-1047 aa

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057776604.1`	Pfam	`PF24933`	DUF7751	Domain	827	887	1.9e-19	70.5	Domain of unknown function (DUF7751)
`XP_057776604.1`	Pfam	`PF07728`	AAA_5	Domain	966	1088	3.1e-05	24.7	AAA domain (dynein-related subfamily)
`XP_057776604.1`	Pfam	`PF00004`	AAA	Domain	966	1096	8.9e-39	133.7	ATPase family associated with various cellular activities (AAA)
`XP_057776604.1`	Pfam	`PF17862`	AAA_lid_3	Domain	1119	1155	3.8e-14	52.6	AAA+ lid domain
`XP_057776605.1`	Pfam	`PF24933`	DUF7751	Domain	719	779	1.9e-19	70.5	Domain of unknown function (DUF7751)
`XP_057776605.1`	Pfam	`PF07728`	AAA_5	Domain	858	980	2.7e-05	24.9	AAA domain (dynein-related subfamily)
`XP_057776605.1`	Pfam	`PF00004`	AAA	Domain	858	988	7.3e-39	133.9	ATPase family associated with various cellular activities (AAA)
`XP_057776605.1`	Pfam	`PF17862`	AAA_lid_3	Domain	1011	1047	3.4e-14	52.8	AAA+ lid domain

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

2 records

下载 cDNA FASTA

XM_057920621.1
TTCATCAGCCACAATTTGTTTTCTTTTTTATATTCTACAAAAAATACTACGAATTACAAAAGCAGATTGTATATATATAATCCATTTCCCGCAATCATTCACTTTTTCCTCTCTTCTCTTATTTCTTCTTCTTTCTCTCTCTAGCTTGCATATATTATACTATATTTTTTGTCTTGGTGGAGGGAGTATTTTCTCTAATTCCCAATCGAAATTGGAGAATTTTGAGGTTTGTATTCTTCGAATTATTAGATCAGGAGCCA...

XM_057920622.1
CGGCGTCGGAGGAAGTGGTGGGCGCCGCCGTGGTGAAGGATTCGGAGGCCGGATCGGCTGATCTGGCTGGCGGCAGCTTGAAGCAGCCTGATGACTTGACGCCGCCGCCGGGGAAGGCGGCTGAGGCGGTGGCCGAAGGTGATTCCAATTTAGATGCTAATAAAGGGAAGTCGAGTGGGATGCTAATAAATGTCGGGCGAAAGCGGCAGCTGAAATCTAATGAAACTGAAACTGGGGATGCATGGGGCAAACTCCTATCT...

CDS

2 records

下载 CDS FASTA

LOC130995363
ATGGTTGAGACGCGGCGGAGCTCGTCTGCCTCGAAGCGCACTCTAAGTGATTCCTCACCTCCTCTGCAAAACGCCAAGCGATCCAAGGCGGCTGAGGCGTCGGCTTCATCAATGAATGATTCGTCGGCGTCGGAGGAAGTGGTGGGCGCCGCCGTGGTGAAGGATTCGGAGGCCGGATCGGCTGATCTGGCTGGCGGCAGCTTGAAGCAGCCTGATGACTTGACGCCGCCGCCGGGGAAGGCGGCTGAGGCGGTGGCCGA...

LOC130995363
ATGGGGCAAACTCCTATCTCAGTGTTCACAGTTCTCTATCTTGACTTGTTTGGTGCAATTTTCCCGTCCCAGAATTCCCATGTTGTTATGCATGGCCCTACATTTAGTGTTGGTCAAGGCCGCCAGTGTGACTTGTGGGTACGAGATCCATTAATCAGTAAGTTGTTGTGTAATCTGAAGCACATTGAGTCTGAGGGTGGGGAATCAGTTACACTCCTTGAAATCAAGGGAAATAAAGGACTTGTTCAAGTTAATGGAAC...

Protein

2 records

下载 Protein FASTA

XP_057776604.1
MVETRRSSSASKRTLSDSSPPLQNAKRSKAAEASASSMNDSSASEEVVGAAVVKDSEAGSADLAGGSLKQPDDLTPPPGKAAEAVAEGDSNLDANKGKSSGMLINVGRKRQLKSNETETGDAWGKLLSQCSQNSHVVMHGPTFSVGQGRQCDLWVRDPLISKLLCNLKHIESEGGESVTLLEIKGNKGLVQVNGTAYAKDSTITLNGGDEVVFSSSTKHAYIFQLLTNTGELTTSEPPSVSILEAHGGSTNGLHIEARSG...

XP_057776605.1
MGQTPISVFTVLYLDLFGAIFPSQNSHVVMHGPTFSVGQGRQCDLWVRDPLISKLLCNLKHIESEGGESVTLLEIKGNKGLVQVNGTAYAKDSTITLNGGDEVVFSSSTKHAYIFQLLTNTGELTTSEPPSVSILEAHGGSTNGLHIEARSGDTSAVAVASTLASLSHLTNELSLIPPSPRNGEDVQQGSEISSVPSACKVSDNCIIDTEMKGPSACNDDVSAAVVGNTGAPSSDIANDNLNNDAEIGKIVGGNNDLRPV...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

下载 upstream 下载 downstream 下载 upstream + gene + downstream

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