Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr07G001775`

染色体: Chr07 坐标: 15041613-15048653 链方向: + 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr07G001775`
名称	SmilChr07G001775
描述	sterol 3-beta-glucosyltransferase UGT80A2
染色体 / SeqID	Chr07 / NC_080393.1
坐标与链方向	15041613 - 15048653 / `+`

ID 对照

NCBI Gene ID	`LOC130995463`
GeneID	`130995463`
locus_tag	`-`
NCBI Name	`LOC130995463`
原始查询	`LOC130995463`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	sterol 3-beta-glucosyltransferase UGT80A2
产物	sterol 3-beta-glucosyltransferase UGT80A2
Arabidopsis	`AT3G07020` (SGT) UDP-Glycosyltransferase superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:819887] identity=79.5; qcov=0.986; evalue=0; confidence=high
Rice	`Os04g0131900` - identity=77.3; qcov=0.988; evalue=0; confidence=high
GO	GO:0005975 (carbohydrate metabolic process); GO:0008194 (UDP-glycosyltransferase activity); GO:0016758 (hexosyltransferase activity); GO:0030259 (GO:0030259)
KEGG	-
Pfam	PF03033 (Glyco_transf_28); PF06722 (EryCIII-like_C)
InterPro	-
eggNOG	-
NR	GeneID:130995463

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Endoplasmic reticulum	内质网	1.00000	`XP_057776735.1`
2	Golgi apparatus	高尔基体	0.20000	`XP_057776734.1`
3	Nucleus	细胞核	0.00000	`XP_057776735.1`
4	Chromosome	染色体	0.00000	`XP_057776735.1`
5	Centromere	着丝粒	0.00000	`XP_057776735.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr7:15041765`	`CAG`	`C`	2bp_deletion	frameshift_variant	4	A15,B16,C29,C54
`Chr7:15041765`	`CAG`	`C`	2bp_deletion	CDS_variant	4	A15,B16,C29,C54
`Chr7:15041846`	`C`	`T`	EMS_canonical_SNV	CDS_variant	4	A4,B34,C20,D10
`Chr7:15041967`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	C39
`Chr7:15042016`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B84
`Chr7:15042097`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	A5
`Chr7:15042111`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B108
`Chr7:15044274`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	D11
`Chr7:15044291`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	C52
`Chr7:15045382`	`C`	`T`	EMS_canonical_SNV	CDS_variant	4	B129,B23,B7,D6
`Chr7:15046331`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	D11
`Chr7:15048397`	`C`	`T`	EMS_canonical_SNV	CDS_variant	5	B100,B57,B98,C28,C48

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057776734.1

704 aa

352

704

Glyco_transf_28

EryCIII-like_C

PF03033 Glyco_transf_28 263-406 aa PF06722 EryCIII-like_C 569-663 aa

XP_057776735.1

513 aa

256

513

Glyco_transf_28

EryCIII-like_C

PF03033 Glyco_transf_28 72-215 aa PF06722 EryCIII-like_C 377-472 aa

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057776734.1`	Pfam	`PF03033`	Glyco_transf_28	Family	263	406	2e-35	122.6	Glycosyltransferase family 28 N-terminal domain
`XP_057776734.1`	Pfam	`PF06722`	EryCIII-like_C	Domain	569	663	1e-11	45.7	Erythromycin biosynthesis protein CIII-like, C-terminal domain
`XP_057776735.1`	Pfam	`PF03033`	Glyco_transf_28	Family	72	215	1.1e-35	123.4	Glycosyltransferase family 28 N-terminal domain
`XP_057776735.1`	Pfam	`PF06722`	EryCIII-like_C	Domain	377	472	7.8e-12	46.1	Erythromycin biosynthesis protein CIII-like, C-terminal domain

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

2 records

下载 cDNA FASTA

XM_057920751.1
TGAGTGGTCCTCAACCAACCAAAACCGGCACTTGATGATACTAAAAATTATAAAAGGAAAAAAAAGAGAGAAACATGTTTTGCGTTAATTTCGCCCACGCGCTAACCGTCGCGTTGAGAAACCAAATACTCCACTTTCCCCTGAATTTCACGCAGAGTTTATTTACTTTATTTTGTTTTAATTTTTCTTCCCACTCTTTTGAACGTGTCTGTGCCCCTAACTGTACACGCATCCTACTCACTCTCACTGTGTGTATTCTA...

XM_057920752.1
TGCGAGAGCAATTTTTCCTAGAGGAAACACTATGCCGCCAGAAATTTTGAACTCCGAGAAACTAGAAGTGCCGCAGGGGTTAGAAAGATCGAAGACAGAGAGGGAGAGATATACTAATGTTCGCGCTGAAGAGGCTGCTCAGATTTTTGATGAAAGAATTCCGGTTCAGGAGAAGAATTGCTACAGTTAAAGATGATGGAACTGTAGAATTTGAAGTTCCAGTTGACGTTGAACCTCGTAGCCTCGGAGCTGGCTCTAAT...

CDS

2 records

下载 CDS FASTA

LOC130995463
ATGTTTTGCGTTAATTTCGCCCACGCGCTAACCGTCGCGTTGAGAAACCAAATACTCCACTTTCCCCTGAATTTCACGCAGAGTTTATTTACTTTATTTTGTTTTAATTTTTCTTCCCACTCTTTTGAACGTGTCTGTGCCCCTAACTGTACACGCATCCTACTCACTCTCACTGTGTGTATTCTACGTATTCGCGCGCCGATACCCGCTGGATTGCTTCTGGAAGTAGCTCTGGATCTGGATCAGAACCCGACTCCGCC...

LOC130995463
ATGTTCGCGCTGAAGAGGCTGCTCAGATTTTTGATGAAAGAATTCCGGTTCAGGAGAAGAATTGCTACAGTTAAAGATGATGGAACTGTAGAATTTGAAGTTCCAGTTGACGTTGAACCTCGTAGCCTCGGAGCTGGCTCTAATAGCATATATACTGAAGTTGATGAAGATGTTCTTGATGCAACAGACATTCAGTATATTCCACCATTGCAGATTGTAATGCTTATTGTTGGAACTCGTGGAGATGTGCAGCCATTTGT...

Protein

2 records

下载 Protein FASTA

XP_057776734.1
MFCVNFAHALTVALRNQILHFPLNFTQSLFTLFCFNFSSHSFERVCAPNCTRILLTLTVCILRIRAPIPAGLLLEVALDLDQNPTPPEPVVLMPKPEEASSSTSSGEVSVKFEEYSPEVAAAAVDSIAGASAAAALSNGGGSDASGSARAIFPRGNTMPPEILNSEKLEVPQGLERSKTERERYTNVRAEEAAQIFDERIPVQEKLKLLNRIATVKDDGTVEFEVPVDVEPRSLGAGSNSIYTEVDEDVLDATDIQYIPP...

XP_057776735.1
MFALKRLLRFLMKEFRFRRRIATVKDDGTVEFEVPVDVEPRSLGAGSNSIYTEVDEDVLDATDIQYIPPLQIVMLIVGTRGDVQPFVAIGKRLQDYGHRVRLATHSNFKEFVLTSGLEFYPLGGDPKVLAEYMVKNKGFLPSGPSEIPIQRNQMKEIIYSLLPACKDPDIDTGVPFKADAIIANPPAYGHTHVAEALKVPIHIFFTMPWTPTSEFPHPLSRVKQPAGYRLSYQIVDSLIWLGIRDMINDVRKKKLKLRPV...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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