当前解析结果
SmilChr07G001865| 统一新 Gene ID | SmilChr07G001865 |
|---|---|
| 名称 | SmilChr07G001865 |
| 描述 | protein WVD2-like 7 |
| 染色体 / SeqID | Chr07 / NC_080393.1 |
| 坐标与链方向 | 16161287 - 16165126 / - |
| NCBI Gene ID | LOC130995552 |
|---|---|
| GeneID | 130995552 |
| locus_tag | - |
| NCBI Name | LOC130995552 |
| 原始查询 | LOC130995552 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | protein WVD2-like 7 |
| 产物 | protein WVD2-like 7 |
| Arabidopsis | AT3G27350 (AT3G27350)transcriptional regulator ATRX-like protein [Source:NCBI gene (formerly Entrezgene);Acc:822356] identity=54.1; qcov=0.166; evalue=1.76e-23; confidence=weak |
| Rice | Os05g0420500- identity=58.7; qcov=0.123; evalue=9.24e-15; confidence=weak |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130995552 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Cytoskeleton | 细胞骨架 | 1.00000 | XP_057776866.1 |
| 2 | Spindle | Spindle | 0.40000 | XP_057776866.1 |
| 3 | Nucleus | 细胞核 | 0.20000 | XP_057776866.1 |
| 4 | Spindle pole | Spindle pole | 0.20000 | XP_057776866.1 |
| 5 | Chromosome | 染色体 | 0.00000 | XP_057776866.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr7:16161625 |
CT |
C |
1bp_deletion | frameshift_variant | 6 | B1,B35,B74,C25,D10,D11 |
Chr7:16161694 |
ATG |
A |
2bp_deletion | frameshift_variant | 5 | B1,B35,B74,D10,D11 |
Chr7:16161694 |
ATG |
A |
2bp_deletion | CDS_variant | 5 | B1,B35,B74,D10,D11 |
Chr7:16161700 |
C |
T |
EMS_canonical_SNV | CDS_variant | 5 | B1,B35,B74,D10,D11 |
Chr7:16161721 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | B1,B35,B74,C25,D10 |
Chr7:16161727 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | B1,B35,B74,D10 |
Chr7:16161756 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B1,B74,C25 |
Chr7:16162082 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | D10 |
Chr7:16162138 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B35,B74 |
Chr7:16162143 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B35,B74,D10 |
Chr7:16162639 |
AC |
A |
1bp_deletion | frameshift_variant | 2 | B53,B60 |
Chr7:16162639 |
AC |
A |
1bp_deletion | CDS_variant | 2 | B53,B60 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。