当前解析结果
SmilChr07G001951| 统一新 Gene ID | SmilChr07G001951 |
|---|---|
| 名称 | SmilChr07G001951 |
| 描述 | uncharacterized SmilChr07G001951 |
| 染色体 / SeqID | Chr07 / NC_080393.1 |
| 坐标与链方向 | 16983713 - 16984535 / - |
| NCBI Gene ID | LOC130995628 |
|---|---|
| GeneID | 130995628 |
| locus_tag | - |
| NCBI Name | LOC130995628 |
| 原始查询 | LOC130995628 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | chaperone protein dnaJ-like protein [Source:NCBI gene (formerly Entrezgene);Acc:834344]; symbol=AT5G43260; hit=AT5G43260; species=arabidopsis; confidence=medium |
| 产物 | chaperone protein dnaJ-like protein [Source:NCBI gene (formerly Entrezgene);Acc:834344]; symbol=AT5G43260; hit=AT5G43260; species=arabidopsis; confidence=medium |
| Arabidopsis | AT5G43260 (AT5G43260)chaperone protein dnaJ-like protein [Source:NCBI gene (formerly Entrezgene);Acc:834344] identity=70; qcov=0.496; evalue=4.61e-29; confidence=medium |
| Rice | Os02g0506600- identity=45.5; qcov=0.546; evalue=9.62e-13; confidence=low |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130995628 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Mitochondrion | 线粒体 | 1.00000 | XP_057776968.1 |
| 2 | Mitochondrion membrane | 线粒体膜 | 1.00000 | XP_057776968.1 |
| 3 | Mitochondrion outer membrane | 线粒体外膜 | 1.00000 | XP_057776968.1 |
| 4 | Nucleus | 细胞核 | 0.00000 | XP_057776968.1 |
| 5 | Chromosome | 染色体 | 0.00000 | XP_057776968.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr7:16983774 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | D3 |
Chr7:16983857 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B65 |
Chr7:16983905 |
CG |
C |
1bp_deletion | frameshift_variant | 1 | B140 |
Chr7:16983905 |
CG |
C |
1bp_deletion | CDS_variant | 1 | B140 |
Chr7:16983976 |
C |
CA |
1bp_insertion | frameshift_variant | 11 | A19,A20,A7,B104,B140,B30,B32,B82,B84,C16,C27 |
Chr7:16984140 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B99,C35,C57 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。