Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr07G001994`

染色体: Chr07 坐标: 17615368-17619499 链方向: + 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr07G001994`
名称	SmilChr07G001994
描述	glucose-6-phosphate 1-dehydrogenase, chloroplastic-like
染色体 / SeqID	Chr07 / NC_080393.1
坐标与链方向	17615368 - 17619499 / `+`

ID 对照

NCBI Gene ID	`LOC130995659`
GeneID	`130995659`
locus_tag	`-`
NCBI Name	`LOC130995659`
原始查询	`LOC130995659`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; NCBI GO GAF; KEGG smil; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	glucose-6-phosphate 1-dehydrogenase, chloroplastic-like
产物	glucose-6-phosphate 1-dehydrogenase%2C chloroplastic-like
Arabidopsis	`AT5G13110` (G6PD2) glucose-6-phosphate dehydrogenase 2 [Source:NCBI gene (formerly Entrezgene);Acc:831150] identity=83.7; qcov=0.904; evalue=0; confidence=high
Rice	`Os07g0406300` (OsG6PDH3) - identity=84.1; qcov=0.844; evalue=0; confidence=high
GO	GO:0004345 (glucose-6-phosphate dehydrogenase activity); GO:0006006 (glucose metabolic process); GO:0009051 (pentose-phosphate shunt, oxidative branch); GO:0009570 (chloroplast stroma); GO:0050661 (NADP binding)
KEGG	smil00030 (Pentose phosphate pathway - Salvia miltiorrhiza (redroot sage)); smil00480 (Glutathione metabolism - Salvia miltiorrhiza (redroot sage)); smil01100 (Metabolic pathways - Salvia miltiorrhiza (redroot sage)); smil01110 (Biosynthesis of secondary metabolites - Salvia miltiorrhiza (redroot sage)); smil01200 (Carbon metabolism - Salvia miltiorrhiza (redroot sage))
Pfam	PF00479 (G6PD_N); PF02781 (G6PD_C)
InterPro	-
eggNOG	-
NR	GeneID:130995659

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Chloroplast	叶绿体	1.00000	`XP_057777009.1`
2	Chloroplast stroma	叶绿体基质	1.00000	`XP_057777009.1`
3	Nucleus	细胞核	0.00000	`XP_057777009.1`
4	Chromosome	染色体	0.00000	`XP_057777009.1`
5	Centromere	着丝粒	0.00000	`XP_057777009.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr7:17616290`	`G`	`A`	EMS_canonical_SNV	CDS_variant	4	A24,A7,B65,C80
`Chr7:17616306`	`C`	`T`	EMS_canonical_SNV	CDS_variant	5	B114,B81,B88,B94,C25
`Chr7:17616370`	`C`	`T`	EMS_canonical_SNV	CDS_variant	5	A24,A7,B140,B65,C80
`Chr7:17617050`	`C`	`CT`	1bp_insertion	stop_gained,frameshift_variant	1	C83
`Chr7:17617050`	`C`	`CT`	1bp_insertion	CDS_variant	1	C83
`Chr7:17617763`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B140

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057777009.1

605 aa

302

605

G6PD_N

G6PD_C

PF00479 G6PD_N 123-301 aa PF02781 G6PD_C 304-598 aa

XP_057777011.1

596 aa

298

596

G6PD_N

G6PD_C

PF00479 G6PD_N 114-292 aa PF02781 G6PD_C 295-589 aa

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057777009.1`	Pfam	`PF00479`	G6PD_N	Domain	123	301	8.4e-59	200.0	Glucose-6-phosphate dehydrogenase, NAD binding domain
`XP_057777009.1`	Pfam	`PF02781`	G6PD_C	Domain	304	598	1.1e-114	383.2	Glucose-6-phosphate dehydrogenase, C-terminal domain
`XP_057777011.1`	Pfam	`PF00479`	G6PD_N	Domain	114	292	8.2e-59	200.0	Glucose-6-phosphate dehydrogenase, NAD binding domain
`XP_057777011.1`	Pfam	`PF02781`	G6PD_C	Domain	295	589	1.1e-114	383.3	Glucose-6-phosphate dehydrogenase, C-terminal domain

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

2 records

下载 cDNA FASTA

XM_057921028.1
GAATATGAAGGAAAAGGAAAATTGAATTAGCATCTCGTTTAGATTCCAATGGCGAAGCCCAAATAGGAAATAGCAATAGCATACAACAGAGACAGGAGAAAGAAATCAGCCTTTCGGAGTTGTCAAGAGTCTTAACCCTTTCGACATTTCCGAAGCTTCTTTGCCTATTCATATTTTGGTCTCCCTTTTCCTTCTTTTTAATTACTACTTATTAGAAAGATCAGTTGCTGTTCAACCGATTGAAAAACACACGCCCGACG...

XM_057921026.1
AATGGCGAAGCCCAAATAGGAAATAGCAATAGCATACAACAGAGACAGGAGAAAGAAATCAGCCTTTCGGAGTTGTCAAGAGTCTTAACCCTTTCGACATTTCCGAAGCTTCTTTGCCTATTCATATTTTGGTCTCCCTTTTCCTTCTTTTTAATTACTACTTATTAGAAAGATCAGTTGCTGTTCAACCGATTGAAAAACACACGCCCGACGTAATTTGTTCAACACAAATTCCAAGCCAAAGTTGATACTATAATGTC...

CDS

2 records

下载 CDS FASTA

LOC130995659
ATGTCTGCACTCTCTTCACCAAATCACTGCTGCTCCTCCTCCTCATCTCTTCATTCCTCTATTGGGTTTCATCAGATTCACAAAAACATCCCTTTCTCTGTGATTCCTCACAAGATTTTTGGTTCAAAAAATGTTTCTTTCCGATCCAAATGCAGCCCTTTGCCTGATGTCCTTCTCATGCAAGATGTCATATCTAAATTTTTGAACTGTCTAGGTGCTTTGGCAACAAAATTGGTTGCCACCAATGAAGGTCCTCCTCT...

LOC130995659
ATGTCTGCACTCTCTTCACCAAATCACTGCTGCTCCTCCTCCTCATCTCTTCATTCCTCTATTGGGTTTCATCAGATTCACAAAAACATCCCTTTCTCTGTGATTCCTCACAAGATTTTTGGTTCAAAAAATGTTTCTTTCCGATCCAAATGCAGCCCTTTGCCTGATGTCCTTCTCATGCAAGATGGTGCTTTGGCAACAAAATTGGTTGCCACCAATGAAGGTCCTCCTCTTCCGAAGGAATTGAAGGAGGGCTTGTT...

Protein

2 records

下载 Protein FASTA

XP_057777009.1
MSALSSPNHCCSSSSSLHSSIGFHQIHKNIPFSVIPHKIFGSKNVSFRSKCSPLPDVLLMQDVISKFLNCLGALATKLVATNEGPPLPKELKEGLLTVNPPEEDENPIDSDAKDANSTVSITIVGASGDLAKKKIFPALFALYYEDCLPEHFTIFGYARSKMTDAELRNMVSKTLTCRIDKRENCGEKMEQFLKRCFYHSGNYDSEENFAELDRKLKEHEAGRISNRLFYLSIPPNIFVDAVKYASLSASSVNGWTRVIV...

XP_057777011.1
MSALSSPNHCCSSSSSLHSSIGFHQIHKNIPFSVIPHKIFGSKNVSFRSKCSPLPDVLLMQDGALATKLVATNEGPPLPKELKEGLLTVNPPEEDENPIDSDAKDANSTVSITIVGASGDLAKKKIFPALFALYYEDCLPEHFTIFGYARSKMTDAELRNMVSKTLTCRIDKRENCGEKMEQFLKRCFYHSGNYDSEENFAELDRKLKEHEAGRISNRLFYLSIPPNIFVDAVKYASLSASSVNGWTRVIVEKPFGRDSE...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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