Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr07G002881`

染色体: Chr07 坐标: 28994023-28999541 链方向: - 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr07G002881`
名称	SmilChr07G002881
描述	magnesium transporter MRS2-5
染色体 / SeqID	Chr07 / NC_080393.1
坐标与链方向	28994023 - 28999541 / `-`

ID 对照

NCBI Gene ID	`LOC130995867`
GeneID	`130995867`
locus_tag	`-`
NCBI Name	`LOC130995867`
原始查询	`LOC130995867`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	magnesium transporter MRS2-5
产物	magnesium transporter MRS2-5
Arabidopsis	`AT2G03620` (MGT3) magnesium transporter 3 [Source:NCBI gene (formerly Entrezgene);Acc:814891] identity=69.1; qcov=0.942; evalue=1.48e-164; confidence=high
Rice	`Os06g0650800` (OsMGT) - identity=59.8; qcov=0.932; evalue=9.21e-143; confidence=high
GO	GO:0015095 (magnesium ion transmembrane transporter activity); GO:0015693 (magnesium ion transport)
KEGG	-
Pfam	PF22099 (MRS2-like)
InterPro	-
eggNOG	-
NR	GeneID:130995867

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Cell membrane	细胞膜	1.00000	`XP_057777313.1`
2	Cytosol	细胞质基质	0.60000	`XP_057777318.1`
3	Cytoplasm	细胞质	0.40000	`XP_057777318.1`
4	Nucleus	细胞核	0.00000	`XP_057777313.1`
5	Chromosome	染色体	0.00000	`XP_057777313.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr7:28995929`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B104
`Chr7:28996941`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	C44
`Chr7:28997189`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	C26
`Chr7:28997198`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	C44
`Chr7:28997350`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	A16,C26
`Chr7:28997376`	`C`	`T`	EMS_canonical_SNV	CDS_variant	5	B131,B24,C17,C30,C74
`Chr7:28997411`	`G`	`A`	EMS_canonical_SNV	CDS_variant	3	B136,B34,C38
`Chr7:28997703`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	D11
`Chr7:28998260`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B120

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057777313.1

422 aa

211

422

MRS2-like

PF22099 MRS2-like 58-245 aa

XP_057777314.1

422 aa

211

422

MRS2-like

PF22099 MRS2-like 58-245 aa

XP_057777316.1

422 aa

211

422

MRS2-like

PF22099 MRS2-like 58-245 aa

XP_057777317.1

422 aa

211

422

MRS2-like

PF22099 MRS2-like 58-245 aa

XP_057777318.1

399 aa

200

399

MRS2-like

PF22099 MRS2-like 58-245 aa

XP_057777319.1

395 aa

198

395

MRS2-like

PF22099 MRS2-like 58-245 aa

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057777313.1`	Pfam	`PF22099`	MRS2-like	Family	58	245	1.7e-36	126.4	Magnesium transporter MRS2-like
`XP_057777314.1`	Pfam	`PF22099`	MRS2-like	Family	58	245	1.7e-36	126.4	Magnesium transporter MRS2-like
`XP_057777316.1`	Pfam	`PF22099`	MRS2-like	Family	58	245	1.7e-36	126.4	Magnesium transporter MRS2-like
`XP_057777317.1`	Pfam	`PF22099`	MRS2-like	Family	58	245	1.7e-36	126.4	Magnesium transporter MRS2-like
`XP_057777318.1`	Pfam	`PF22099`	MRS2-like	Family	58	245	1.4e-36	126.7	Magnesium transporter MRS2-like
`XP_057777319.1`	Pfam	`PF22099`	MRS2-like	Family	58	245	1.4e-36	126.7	Magnesium transporter MRS2-like

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

6 records

下载 cDNA FASTA

XM_057921335.1
TCGGTAACGTACGTCTCTTCTCTCTCTCTCACACACACACGCACGCTGACACCAGAGCCACAGGCACAAAAATATGTTCCGAAAAGAGTGTCAGTTCAAAGTGAATCGAGAATCTCCTTAGCCCAAACTTTGCGAATCAAGACGGATTCTTGTGACGAAAGACTGCAGGCACTAGCCAAAATCTTGAAGTCGACCGATGAAGAGAGCTCTTAGATGTGAAGGTCTGGATGAGATAAAGGAGAGAAGAAGTCTAACAAAAT...

XM_057921336.1
CGGTAACGTACGTCTCTTCTCTCTCTCTCACACACACACGCACGCTGACACCAGAGCCACAGGCACAAAAATATGTTCCGAAAAGAGTGTCAGTTCAAAGTGAATCGAGAATCTCCTTAGCCCAAACTTTGCGAATCAAGACGGATTCTTGTGACGAAAGACTGCAGGCACTAGCCAAAATCTTGAAGTCGACCGATGAAGAGAGCTCTTAGATGTGAAGGTCTGGATGAGATAAAGGAGAGAAGAAGTCTAACAAAATG...

CDS

6 records

下载 CDS FASTA

LOC130995867
ATGGCTCAACCTGAAGCACCATCATTCGGTGCTGATCCCGAATCTTTAATCTCTTCTCTGAACCCCCCTTCAAGCTATTATGTTAATGGTATTGGGAGGCACAATGCATGTGGACCTGGATTTCCAGGCTTAAAGAAGAGAACTCATAATCTTGGAAATCGGTCATGGATACTGATTGATACGAAAGGGAACTCAGAAGTTGTGGAACTGGATAAGTCTACTGTCATGAGGCGTTGCTCGTTGCCTTCCAGAGATCTCAG...

Protein

6 records

下载 Protein FASTA

XP_057777313.1
MAQPEAPSFGADPESLISSLNPPSSYYVNGIGRHNACGPGFPGLKKRTHNLGNRSWILIDTKGNSEVVELDKSTVMRRCSLPSRDLRLLDPLFIYPSSILGREKAIVVSLEQIRCIITADEVILKNSVEESVLQYKYELCKRLEVSKDSYDDLPFEFRALEVALEHTCMSLDAQVKDLELDIYPVLDELASSISTLNLERVRRFKGSLLALTQRVQKVCDEIEHLMNDDGDMAEMYLTEKKERRDILTDSDICNQINTSE...

XP_057777314.1
MAQPEAPSFGADPESLISSLNPPSSYYVNGIGRHNACGPGFPGLKKRTHNLGNRSWILIDTKGNSEVVELDKSTVMRRCSLPSRDLRLLDPLFIYPSSILGREKAIVVSLEQIRCIITADEVILKNSVEESVLQYKYELCKRLEVSKDSYDDLPFEFRALEVALEHTCMSLDAQVKDLELDIYPVLDELASSISTLNLERVRRFKGSLLALTQRVQKVCDEIEHLMNDDGDMAEMYLTEKKERRDILTDSDICNQINTSE...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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